Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1731777 86.0 4e-12
seq2929101 84.2 1e-11
>seq1731777
Length=2471
Score = 86.0 bits (94), Expect = 4e-12
Identities = 156/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 34488 AAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCG 34547
||| | |||||| | ||| |||||| ||||||||||||||| || || || | || |
Sbjct 710 AAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACA 769
Query 34548 CTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTC 34607
||||||| ||||| || || ||||| || | | || || || || | | ||| ||
Sbjct 770 TCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTC 829
Query 34608 CTTGT-CTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGG 34666
|| | ||| |||||| ||||| | | |||||||| | || || || | |
Sbjct 830 CTCATACTG-GATCTTGGCTTTTACATTTTATATTGTGTCCGAGGGTTCAACCTCGAGAG 888
Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712
| || || || || | | ||||| |||||||||||||| |||||
Sbjct 889 TGATGGTCTTCCCCATAAGGGTTTTTACAAAAATCTGCATTTTGAT 934
>seq2929101
Length=1797
Score = 84.2 bits (92), Expect = 1e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||| | | ||||| || |||||| ||| | || ||||| ||||||||||| || ||
Sbjct 936 AGATGAAGCACCAGGTGCAGAGTGGACTCTTCCTGGATGTTGTAATCTGAAAGAGTGCGG 995
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || |||||| | | |||||| | | |||| ||||| || || | |||||||
Sbjct 996 CCATCCTCCAGCTGTTTATCCGAAAATATCAGATGCTGCTGGTCAGGTGGGATTCCCTCC 1055
Query 34609 TTGTCT 34614
||||||
Sbjct 1056 TTGTCT 1061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 302335066914065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |