Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1537392 113 4e-20
seq2031399 98.7 8e-16
seq1731777 91.5 1e-13
>seq1537392
Length=19804
Score = 113 bits (124), Expect = 4e-20
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||||||||||| | || || || || || || ||
Sbjct 11860 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTAGAGCCCAAT 11919
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||| |||| || |||||||| |||||||| | || |||||
Sbjct 11920 GACACCATTGAGAATGTCATGGAAAAGATCCAAGACAAGGAAGGCATCCTTCCTGATCAG 11979
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| |||| || | || || ||||| || |||| | ||| | || || ||||||
Sbjct 11980 CAGAGTTTGATCTTTGCTGGGAAACAGGTGAAAGATGGACACACCCTGTCTGACTACAAC 12039
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTG 27194
|| || || ||||| ||| | || |||
Sbjct 12040 ATCCAGAAAGAGTCCACCCTGCACTTG 12066
>seq2031399
Length=344
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || |||||||| || || || ||| |||| ||||| || || ||||| ||
Sbjct 22 ATGCAGATTTTCGTAAAAACCCTTACAGGGAAGACTATCACTCTCGAGGTCGAACCCTCG 81
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || || || || || ||||| || || || |||||
Sbjct 82 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 141
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || ||||| ||| ||||||| | || | || || ||||||
Sbjct 142 CAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 201
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||||||||| || | ||| | || ||| | | || |||||
Sbjct 202 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 248
>seq1731777
Length=2471
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||||||||| || | || ||| | || ||||| || || ||||| ||
Sbjct 928 ATGCAGATTTTTGTAAAAACCCTTATGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 869
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || | | || ||| || || || | | ||||| || | || |||||
Sbjct 868 GACACAATATAAAATGTAAAAGCCAAGATCCAGTATGAGGAAGGAATTCTTCCTGATCAG 809
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || ||||| ||| |||||||| | | || | || || ||||||
Sbjct 808 CAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGACGGATGTACTTTGTCTGACTACAAC 749
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200
|||||||||||||| || | ||| | || |||
Sbjct 748 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTG 716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 417793722097865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |