Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq2677557 93.3 3e-14
seq1549142 84.2 2e-11
>seq2677557
Length=202
Score = 93.3 bits (102), Expect = 3e-14
Identities = 131/183 (72%), Gaps = 1/183 (1%)
Strand=Plus/Plus
Query 39103 ATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGC 39162
|| || || |||| ||| || | | || || ||| ||||||| |||||||| |||| |
Sbjct 8 ATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATCAGACAC 67
Query 39163 TGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTA 39222
|||||||||| ||| | || ||| ||||| |||||| ||||| || | | ||
Sbjct 68 TGCTGGTCGG-GGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCGATGGTG 126
Query 39223 TCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGC 39282
|| || | |||||| || | ||||| | || || ||||| || || || ||||| |||
Sbjct 127 TCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGC 186
Query 39283 ATC 39285
|||
Sbjct 187 ATC 189
>seq1549142
Length=19220
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/158 (73%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTT 39188
|| || |||||||||||||||||||| |||| |||| |||| |||||| | || ||| ||
Sbjct 14407 TCTTCCAGCTGTTTGCCCGCAAATATCAGACACTGCAGGTCAGGTGGG-ATGCCCTCCTT 14465
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
|| |||||| | ||||| || | | |||| || ||| || || | |||||
Sbjct 14466 GTTTTGGATTTTGTCTTTGACATTCTCAATGATATCACTGAGCTCGACCTCAAGGGTGAT 14525
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
| || || || || || || |||||||| |||||||
Sbjct 14526 GGTCTTGCCTGTTAGGGTCTTCACAAAGATCTGCATCT 14563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412629437201465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |