Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq394582 381 4e-101
seq1611918 230 2e-55
seq1921304 152 4e-32
seq1537755 127 1e-24
seq365164 96.9 2e-15
>seq394582
Length=1925
Score = 381 bits (422), Expect = 4e-101
Identities = 564/794 (71%), Gaps = 4/794 (1%)
Strand=Plus/Plus
Query 27000 TGCCATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGC 27059
||||||| ||| |||||| |||||| || | |||||||| | |||||||||
Sbjct 557 TGCCATCTCCATTTTTATGGTGGGATGTGGATTATAACCCTCTAAACTGAAATCCTCCCT 616
Query 27060 CTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGG 27119
|||||||| || | | || |||| || | |||||||| |||||||| ||
Sbjct 617 TTTAAAGTCATCAATACAGCTAACTTTCCTCAGAATGGTTAGTGTGGGGAAGGGTCTTGG 676
Query 27120 CTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCC 27179
||||| | |||| | || | || || | ||| | || || | ||| || |||||
Sbjct 677 GGTCCTCTGTAACTGAATTTTTATAGGCTCTATGTGGTTGAGATAAATGTGTGCATCTCC 736
Query 27180 CAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAG 27239
|| || || ||||| || ||||||| || | || | ||| || |||||||| || ||
Sbjct 737 AAGTGTATGCACAAAATCACCCGGTTTTAAGTCTGTTAGGTGTGCAATCATGTAAGTCAG 796
Query 27240 GAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTA 27299
|| || || || || | ||||| || ||||| || |||||||||||||| ||||| ||
Sbjct 797 CAGTGAATAACTAGCCACATTAAATGGAACCCCCAGGCCCATGTCCCCCGATCTCTGATA 856
Query 27300 GAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGG 27359
|||||||| || | |||||||| || ||||| || || || ||| || |||||
Sbjct 857 AAGCTGACATGACAACTCTCCATTAGCCACATAAAATTGGGCTAGGGTGTGACAGGGAGG 916
Query 27360 AAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTC 27419
|| ||||| ||| | ||| ||||| |||||||| |||| ||||| | |||||| |
Sbjct 917 CAGGGCCATCAGGGAAAGGTCCTTGGGATTCCAGGCACACAATATGATTCTCCTGTC-AC 975
Query 27420 TGGG-TTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 27478
|||| || || ||||| ||| | | ||||| || || || | ||| || || |
Sbjct 976 TGGGATTCTTTCTGATCGTGTCAATCACATTTTGTAGTTGGTCAATCCCTTGTCCAGAAT 1035
Query 27479 AGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCG 27538
| ||| ||||||| |||| |||||||| || |||||||| || || || || | |
Sbjct 1036 AATCTGAGTTCATGTCTCTGTAGTCTGCTCCAAAGTGCCTCCACTGAAAGCCATAGATAG 1095
Query 27539 GTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAAC 27598
|||||||||| ||||| || || ||| || ||||| ||||||||||| || |
Sbjct 1096 GTCCCAGGTCACCCTCGGTTCTATGAGTGAAACCGTGTTTGTCTAAAAAGTCTCTAGAGC 1155
Query 27599 CGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTC 27658
| |||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |
Sbjct 1156 CATTGGCGTCCCAGATGTTTACCCCCTTTGATGAAAGCTCTTTGGAGTTTGTTGACCCCC 1215
Query 27659 TGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGA 27718
|| ||||| || || ||||||| || || ||||||||| ||||| || |||| |
Sbjct 1216 GAACAAACCATAGAAGTTCCTCCAGAACACCCCGCCAAAAGACTCTCTTAGTTGTGAACA 1275
Query 27719 GGGGAAACTGTCCCTTGAGGCCGTACCTGGCCTGAGAACCAAACACGGACAAGACTCCCG 27778
|| || ||||| | ||| ||||||| ||| || ||||| || || ||| | |||
Sbjct 1276 AAGGGAATTGTCCTCTTAGGGAGTACCTGCTCTGTGAGCCAAAGACAGA-GAGAGTGCCG 1334
Query 27779 -TGCCCGTCCTGTC 27791
||| || |||||
Sbjct 1335 ACGCCTGTTCTGTC 1348
>seq1611918
Length=7152
Score = 230 bits (254), Expect = 2e-55
Identities = 426/623 (68%), Gaps = 24/623 (4%)
Strand=Plus/Minus
Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165
|| || ||||| || || | || |||||| |||||| || || | ||||| | |||
Sbjct 3713 GGGAATGGTCTTGGTTCTCGCTA-AGCTGAACCTTCAGTGGCTCAATGTGATTCTAGTAA 3655
Query 27166 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 27225
| || || ||||||| || || ||||| || || || | ||| || |||| ||||||
Sbjct 3654 ATATGTGCATCTCCCAAAGTATGTACAAAGTCACCTGGCTTTAGACCAGTGATGTGAGC- 3596
Query 27226 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 27285
|| | |||||||| |||||| || || | || || ||||||||
Sbjct 3595 ---------------AGGGCGTAGCTGGTGATGTTGAACGGCATGCCCAGGCCCATGTCT 3551
Query 27286 CCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATG 27345
|| ||| |||||| ||||| || || ||||| || | || || ||||| || | |
Sbjct 3550 CCTGACG-CTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACATAGAACTGGCAGAGG 3492
Query 27346 GCGTGGCACGGAGGAAGAGCCAT--GAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACACG 27402
|| ||||| | ||| || ||||| |||| ||| ||| | || ||||| || |||| |
Sbjct 3491 GCATGGCATGAAGGCAGTGCCATCAGAGG---AAGATCTGTTGGATTCCAAGCACACATG 3435
Query 27403 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCC 27462
||||| | ||||| || | |||| | ||||| || | | ||||| || || ||
Sbjct 3434 ATGATTCTTCTGTCGTCAGAGTTGGTTTTGATGGCATCAATCACTTTTTGTAGTTGGTCA 3375
Query 27463 ACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCAT 27522
|| || || || || ||| ||| || |||| ||||| || |||||||||||
Sbjct 3374 ACTCCTTGACCTGAATAATCTGAATCCATATCTTTGTATTCTGCCCCAAAATGCCTCCAC 3315
Query 27523 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCC 27582
||||| | | || || |||| ||| || ||| | ||| ||| ||| |||
Sbjct 3314 TGGAAGTCAAAAACTGGGCCCAAGTCCCCTTCTCCTCTGGTGGAGAATCCCAGGCCATCC 3255
Query 27583 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 27642
| |||||||| ||| |||||||| |||||||| || || ||||| || || |||||
Sbjct 3254 AGAAAGTCTCGGGACCCGTTGGCATCCCAGATTTTCACTCCCTTGGAAGACAGTTCTTTA 3195
Query 27643 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 27702
| |||||||| || |||| ||||||||| |||||||| || ||||||| || ||
Sbjct 3194 GCATTTGTGGATCCCTTGACAGACCACAGCAACTCCTCCAAAACACCCTTCCAGAACACA 3135
Query 27703 CTCTTGGTCGTGAGGAGGGGAAA 27725
| ||||| || || || |||||
Sbjct 3134 CATTTGGTTGTCAGCAGAGGAAA 3112
>seq1921304
Length=364
Score = 152 bits (168), Expect = 4e-32
Identities = 203/279 (73%), Gaps = 6/279 (2%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| ||||||| ||| || |||||||||||||| || | |||||||||||||| || ||
Sbjct 355 AGACCGGTGATGTGTGCGATCATGTACGTGAGCAGGGCCTAGCTGGCGATGTTGAACGGC 296
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| | || |||||||| |||||| |||||| ||||| || || ||||| ||||
Sbjct 295 ACGCTCAGGCCCATGTCTCCCGACAGCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 236
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT--GAGGCCCAAG-TCTTTG 27384
||||| ||||| || || || |||||||| || ||||| ||| ||| |||||
Sbjct 235 ACGTAGAACTGGCAGGGCGCATGACACGGAGGCAGCGCCATCAAAGG---AAGATCTTTT 179
Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444
|| ||||| || |||| |||||| | ||||| || |||||| | ||||| || |
Sbjct 178 GGATTCCAAGCACACATGATGATTCTTCTGTCGTCAGGGTTGGTTTTGATGGTATCAATC 119
Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCT 27483
| |||||||| || || || || ||||| || |||
Sbjct 118 ACTTTTTGCAGTTGGTCAACTCCTTGACCCGAATAATCT 80
>seq1537755
Length=8267
Score = 127 bits (140), Expect = 1e-24
Identities = 127/165 (77%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266
||| || |||| ||| || |||||||| ||||| || | ||||||||||||||| || ||
Sbjct 5592 TAGACCAGTGATGTGCGCAATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAACGG 5651
Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326
|| || || |||||||| || |||| |||||| ||||| || || ||||| || |
Sbjct 5652 CACGCCCAGGCCCATGTCTCCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCAC 5711
Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
|| || ||||| || | ||| ||||||||||| || ||||| ||
Sbjct 5712 CACATAGAACTGGCAGAGGGCATGGCACGGAGGCAGCGCCATCAG 5756
>seq365164
Length=4430
Score = 96.9 bits (106), Expect = 2e-15
Identities = 122/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
||| || |||| ||||| || ||||||||||||||||| || || || || |||| |||
Sbjct 3739 CATATCTTTGTATTCTGCCCCAAAATGCCTCCATTGGAAGCCATAAACTGGGCCCAAGTC 3680
Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608
|| ||| | ||| ||| ||| |||| |||||||| ||| || ||||| ||
Sbjct 3679 CCCTTCTCCTCTGGTGGAGAATCCCAGGCCATCCAGAAAGTCTCGGGATCCATTGGCTTC 3620
Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656
|||||| || || ||||| || || ||||| | |||||||| ||
Sbjct 3619 CCAGATTTTCACTCCCTTGGAAGAAAGTTCTTTAGCATTTGTGGATCC 3572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354955441233455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |