Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1557410 309 4e-79
seq1615235 125 1e-23
seq2307158 111 2e-19
seq1769580 105 9e-18
seq1599774 105 9e-18
seq1725941 102 1e-16
seq3052344 93.3 6e-14
seq1005051 87.8 2e-12
>seq1557410
Length=8730
Score = 309 bits (342), Expect = 4e-79
Identities = 642/943 (68%), Gaps = 21/943 (2%)
Strand=Plus/Plus
Query 47790 GTTCTTTAA-AAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845
|||| |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||
Sbjct 6476 GTTCATTAAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCC 6535
Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905
||| | ||| ||| || || | ||||| || || || || || ||||||| ||| ||
Sbjct 6536 CATCCTCTGACATTTGCCTACTCTCTTCTCAAAGAAGTTGGTCTTTCCTTCCAGTGAAAT 6595
Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965
||| |||||||| ||||||||||| || | ||| || | || || | |||
Sbjct 6596 ATTCTCCATAAAGTCAAATGGATTTTCTACTCGGAAAACCTTGCTGAAACCCAGTTCCAG 6655
Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTT-CA--CAATT-CATTC 48021
| ||||| ||||| || || || | || || || |||| || ||||| |||
Sbjct 6656 CCTAAGTCTGTCTGCCACAAACTCAACGTA-CTGCTC--CATTAACATGCAATTTCATCG 6712
Query 48022 CTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCA 48081
| | | || || | | ||||| || |||||||| ||||| || | |||||||
Sbjct 6713 CAAAGTGCTTCACCAGCAAGGCCTCAGTGAGAAACTCCTGTTCTATCCTAACAGCATTGC 6772
Query 48082 CTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAAC 48141
||||| | |||| | | ||| |||| | | || ||||| ||||| | |
Sbjct 6773 TAATTATTTCTTTTACTCTCTGCTCTAATGGTTTGTGTACCAGGTGTTTGAACATCAGGC 6832
Query 48142 ATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGAC 48201
| ||||| |||||| | | ||| |||||||| ||| | | ||| | ||||||||||| |
Sbjct 6833 AGGCAAAGTCACAACGTAAACCCTCATCTCTGCTAGTAAGTTCATAGGAAAATGTGAGGC 6892
Query 48202 CGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATA 48261
| ||||| ||||| | ||| || ||||| ||||| | || ||| | ||||||||||| |
Sbjct 6893 CAGGCATCAGTCCTCATTTCTTTAGCCAGAATATCGATGCAAAAAAACCAGAAAAGAAGA 6952
Query 48262 TGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTA 48318
||||||| || || ||||| || || |||||||| | || || |||| |
Sbjct 6953 TGCCTTCCACTGCGGCAAAGGCTACAACATGTTCTCCGTAGGTAGCCTCTTTGTCCCCAA 7012
Query 48319 TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 48378
|||| | | |||||| |||||| ||| ||||||||||| ||||| || ||||| |
Sbjct 7013 TCCAACACAAGGTCCAATCCGCCTTCATCTAGACACAAGGCATCGTTTCAATGGCATTGA 7072
Query 48379 AGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTT 48438
||||||| | |||| || |||||||| |||||| || || |||||||||||||| |
Sbjct 7073 AGAGAAATTCCCTTTCTTTAGAATCTTTAATGTAAGTGTCAATAAAAAGACTATACATCT 7132
Query 48439 CGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCT 48498
|| || || |||| | || || || || || || ||||| ||||| ||| ||
Sbjct 7133 TAGAATGCATGTTTTTTGTGGCAATTTGGAAGCCATAGAAACAGTAGGCTTC--TGAACT 7190
Query 48499 GTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAA 48558
|| | |||||| | | |||| || ||||||||| | | ||||| || ||||
Sbjct 7191 ---TCT-TGGCCAAAAT-GCGCCACCAAGTTGTCATTTACTGTGCTGTCACTTGCTGCAA 7245
Query 48559 AAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCAT 48618
| || || | ||| | || |||| | | | | | || | | ||||| |
Sbjct 7246 AGAAAGCCAGAACACGAGATATGAAATGTCTCTTCTCAGGCTTCTGGGCTTCCCAGTGCT 7305
Query 48619 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTAT 48678
|| || || || | ||| || || || || |||||||| || | ||| ||||| ||||
Sbjct 7306 AAATGTCCTTGGAAAGATCCACCTCCTCCGCCGTCCAAAAGGAAGGCTCAGCTTTCTTAT 7365
Query 48679 ACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
|||| ||| |||||| ||||| || ||||| || |||||
Sbjct 7366 ACATTCACCAAATATCATGGTATTCAATAGGGAAGATGACAAA 7408
>seq1615235
Length=3244
Score = 125 bits (138), Expect = 1e-23
Identities = 99/119 (83%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| ||||| | ||| || ||||||||||| || ||||| ||||| ||||| |||
Sbjct 3111 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 3052
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||| ||||||| || ||||| ||||||||||| |||||||| || || ||||| ||
Sbjct 3051 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGC 2993
Score = 86.0 bits (94), Expect = 8e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 48391 tttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450
|||| ||| |||||||| |||||| || || | |||||||||||||| || || || |
Sbjct 1383 TTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 1324
Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505
|||| || || || || || || || ||||| | |||||||| ||||| || ||
Sbjct 1323 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGAGCTTCTGTAATCTGAACTTC 1269
>seq2307158
Length=1450
Score = 111 bits (122), Expect = 2e-19
Identities = 109/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
|| || ||||| || | || ||||| ||||| |||||||| | |||||||| || ||
Sbjct 311 GTACCAGCATTGAAGAGAGTAGGAGAAGCATGAGTAAACCACCTCTCAGAAAGAAGGTTA 252
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
||||||||||| || | || ||||| || ||||| ||||| | ||| | |||||||
Sbjct 251 TATGTTTCAATTGCAGCATCAATGTCTTCTTTGTGAATCCCTACAGATACTCTCATCAAC 192
Query 78519 ATATGCTGAGGTCTTTCAACC 78539
|||||||| ||||||||| ||
Sbjct 191 ATATGCTGTGGTCTTTCAGCC 171
>seq1769580
Length=2278
Score = 105 bits (116), Expect = 9e-18
Identities = 111/144 (77%), Gaps = 4/144 (3%)
Strand=Plus/Minus
Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845
|||| |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||
Sbjct 1477 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCC 1418
Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905
||| | |||||||| || || | ||||| || || ||||| || ||||||| ||| ||
Sbjct 1417 CATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAAT 1358
Query 47906 ATTTTCCATAAAATCAAATGGATT 47929
||| |||||||| |||||||||||
Sbjct 1357 ATTCTCCATAAAGTCAAATGGATT 1334
>seq1599774
Length=14829
Score = 105 bits (116), Expect = 9e-18
Identities = 103/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
||||||||||| |||| ||||| ||||| || || || ||||| || ||||| | ||
Sbjct 6600 TGAAATTCTCCTGACAGGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATGGAC 6541
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
||||| || |||| || |||||||| |||||||| ||||| || || | | ||||||
Sbjct 6540 TCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 6481
Query 77247 TTTCTGAGACCAT 77259
||||| | |||||
Sbjct 6480 TTTCTTATACCAT 6468
>seq1725941
Length=6718
Score = 102 bits (112), Expect = 1e-16
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
||||||||||| |||||||| || ||||| ||||||| || ||||| | || | |||
Sbjct 3047 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCACGCTGT 3106
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
||||| |||||||| ||||| || | ||| || ||||| | || || |||||||| ||
Sbjct 3107 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTGAATGCCAAGGC 3166
Query 78123 TCTAGATATATTGC 78136
|| || || || ||
Sbjct 3167 TCCAGGTAGATAGC 3180
>seq3052344
Length=222
Score = 93.3 bits (102), Expect = 6e-14
Identities = 144/204 (71%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933
||||| ||| ||||| ||| ||| | | |||||||| |||| | | ||| |||||
Sbjct 21 TCCAGCGGAACCAAAACCTCCTGAAC--CCCTTTCAGTGTCATCCAAAACTTGAACTTCT 78
Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993
| | || |||||| | || |||| | | || || || || || | |||||| | ||
Sbjct 79 TCTATTTCGGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATCCGATCACCTTTTTTG 138
Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053
| |||||| | ||||| ||| ||| | ||| | || |||| | ||||||||||||
Sbjct 139 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCT 198
Query 46054 TCATCTATTACTCCCCCTCCCACA 46077
|||||||| || || |||| |||
Sbjct 199 TCATCTATGACACCAGCTCCTACA 222
>seq1005051
Length=233
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/231 (69%), Gaps = 5/231 (2%)
Strand=Plus/Plus
Query 48335 ATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttC 48394
||| ||||||||||| || ||||||| |||| || || | |||||||| | ||||
Sbjct 4 ATCTGCCTTCTTCTTCACGCAAGGCAGCATTTCAATGGCGCTGAAGAGAAATTCCCTTTC 63
Query 48395 ATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTC 48454
||| ||||||| | || || | ||| ||||||||| || || | || ||||
Sbjct 64 TTTGAAATCTTTA----ATGTGTCCA-TAAGCAACTATACATCTCAGAAGGTATGTTTTA 118
Query 48455 AATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAA 48514
| || || || || || || ||||| |||||||| ||||| || || | ||
Sbjct 119 CGTGGCAATTTGGAAGCCATAGAAACAGTGGGCTTCTGTAATCTGAACTTCTTGGCTGAA 178
Query 48515 TCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGC 48565
|| || || | || ||||||||| | || ||||| || ||||| || ||
Sbjct 179 ACGCTCCACCCAGTTGTCATTTACTCTGCCGTCACTTGCTGCAAAGAAAGC 229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666610215415200
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