Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq2031399 114 9e-21
seq1581579 114 9e-21
seq1627958 104 2e-17
seq1537392 100 2e-16
seq1852988 95.1 8e-15
seq1731777 91.5 1e-13
seq2929101 84.2 2e-11
seq2677557 82.4 5e-11
>seq2031399
Length=344
Score = 114 bits (126), Expect = 9e-21
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| ||||||||| |||||||| || | | ||
Sbjct 239 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 180
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||| ||||| || ||||| |||| | |||||||| | ||| | ||||||
Sbjct 179 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 120
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || |||| || || | || ||| ||||| | ||
Sbjct 119 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTG 60
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || || ||||| || ||||| || |||||
Sbjct 59 ATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCAT 22
>seq1581579
Length=3724
Score = 114 bits (126), Expect = 9e-21
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || |||| |||| |||||||| || ||| ||| || ||||||||||| || |
Sbjct 3026 CCTCCCCTCAAGCTCAGGACCAGGTGCAGGGTGAACTCTTTCTGGATGTTGTAGTCAGAC 2967
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| |||| | | ||||||| ||||| |||||||||||| | ||||||||| |||||
Sbjct 2966 AGGGTGCGCCCATGTTCCAGCTACTTCCTGGCAAAGATCAACCCCTGCTGATCGGAAGGG 2907
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| ||||||| || ||||| ||| | |||| ||||||| ||| || |||
Sbjct 2906 ATGTCTTCCTTGTCTTGGATCTTTGCCTTGACATTTCCAGTGGTGTCACTGGACTCAACC 2847
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGAT 44331
| | || || |||| || || | |||||||| ||||||
Sbjct 2846 TTGAGGGTGATGATCTTGCCAGTCAAGGTCTTCAGGAAGAT 2806
>seq1627958
Length=3316
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
||| |||| ||| || ||| ||| || | ||||||||| || | | ||| | ||
Sbjct 306 CAAGACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGACACGGTGCGTCCATC 247
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|||||||| ||||||||||||||||| | ||||||||| | || | |||||||| ||
Sbjct 246 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGGATGCCTTCCTTGTC 187
Query 44245 CGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
||||| ||| | | ||| | |||||||| || || || || | || || |
Sbjct 186 TTGGATCTT-TGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACTTCAAGGGTGATGG 128
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || || ||||||||||| ||||| |||||
Sbjct 127 CCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 94
>seq1537392
Length=19804
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 8/211 (4%)
Strand=Plus/Minus
Query 44131 CAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAG 44190
|| ||| || ||| ||| || ||||||||||| || | || | | | || | ||
Sbjct 12066 CAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCAC 12007
Query 44191 CTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTAT 44250
||| ||||| ||||||||||||| ||||||||| | | | | |||||||| || ||
Sbjct 12006 CTGTTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGAT 11947
Query 44251 CTTCTGCTTCAATG---TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||| ||| ||| ||| | |||||||| || || ||||| | || || ||||
Sbjct 11946 CTT----TTCCATGACATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCT 11891
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || ||||||||||| ||||| |||||
Sbjct 11890 TGCCGGTCAGGGTCTTCACAAAGATCTGCAT 11860
>seq1852988
Length=3013
Score = 95.1 bits (104), Expect = 8e-15
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| | ||||||| |||||||| || ||| |
Sbjct 2215 AGTCTCAACACAAGATGAAGAGTGGACGCCTTTTGAATGTTGTAGTC--AAAGT--ACAT 2160
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| | ||||| ||||| || ||||| |||| | |||||||| | ||| | ||||||
Sbjct 2159 CCATTTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 2100
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || || | || || | || ||| ||||| | ||
Sbjct 2099 TTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAACCTCGAGAGTG 2040
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || || ||||| || ||||| || |||||
Sbjct 2039 ATGGTCTTCCCTGTAAGGGTTTTTACGAAAATATGCAT 2002
>seq1731777
Length=2471
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| ||||||||| |||||||| || | | |
Sbjct 711 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACAT 770
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
|||| ||||| ||||| || ||||| |||| | |||||||| | | | | ||||||
Sbjct 771 CCGTCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTCC 830
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
| | | ||||| || | || ||| ||||| | || ||| ||||| | ||
Sbjct 831 TCATACTGGATCTTGGCTTTTACATTTTATATTGTGTCCGAGGGTTCAACCTCGAGAGTG 890
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||| | ||||| || || || || |||||
Sbjct 891 ATGGTCTTCCCCATAAGGGTTTTTACAAAAATCTGCAT 928
>seq2929101
Length=1797
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/207 (70%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || ||| ||| | |||||||||||||| | || ||| | || ||
Sbjct 944 CACCAGGTGCAGAGTGGACTCTTCCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCCTC 1003
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||| || | | ||| |||| | ||||||| || | || | || ||||| || |
Sbjct 1004 CAGCTGTTTATCCGAAAATATCAGATGCTGCTGGTCAGGTGGGATTCCCTCCTTGTC--T 1061
Query 44248 TATCTTCTG-CTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
| || || ||| | ||| | |||||||| ||| | ||||| | || || |||
Sbjct 1062 TGGGTTTTGACTTTGACATTCTCGATGGTGTCACTGGACTTGACCTCAAGGGTTATGGTC 1121
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATT 44332
|| ||||| ||||||||||| || |||
Sbjct 1122 TTGCCCGTCAGGGTCTTCACCAATATT 1148
>seq2677557
Length=202
Score = 82.4 bits (90), Expect = 5e-11
Identities = 134/186 (72%), Gaps = 9/186 (5%)
Strand=Plus/Plus
Query 44156 ATGTTGTAATCGGC--GAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAA 44212
|||||||| |||| |||| |||| | || |||||| | || || ||||| |||| |
Sbjct 8 ATGTTGTAGTCGGAAAGAGTGTGGC---CATCCTCCAGCCGTTTGCCTGCAAATATCAGA 64
Query 44213 CGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTAT 44271
| |||||| || | || | || ||||| || || || |||| | |||| | ||
Sbjct 65 CACTGCTGGTCGGGGGG-ATGCCCTCCTTGTCTTGGATTTTG-GCTTTGACGTTCTCGAT 122
Query 44272 GGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGAT 44331
|||||| || |||||||| | || || ||||| || || |||||||||||||||||
Sbjct 123 GGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGAT 182
Query 44332 TTGCAT 44337
|||||
Sbjct 183 CTGCAT 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345813427375185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |