Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1715087 125 2e-23
seq1537392 122 2e-22
seq2677557 120 7e-22
seq1799193 116 9e-21
seq2929101 114 3e-20
seq2447078 91.5 3e-13
seq2490240 89.7 1e-12
seq1292660 89.7 1e-12
seq2955825 87.8 4e-12
>seq1715087
Length=7196
Score = 125 bits (138), Expect = 2e-23
Identities = 129/167 (77%), Gaps = 4/167 (2%)
Strand=Plus/Minus
Query 177966 GAGGTGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAG 178023
|||||||| || ||| ||||||||||||| || || ||||| ||||| |||||||
Sbjct 7194 GAGGTGGA--GCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAG 7137
Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083
| ||||| || |||||||| | || ||||| || || || ||||| |||||||| | |
Sbjct 7136 GGATCCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGTCGCA 7077
Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130
||||| | || || ||| |||| ||||| ||||| ||||| || |||
Sbjct 7076 CTCTTTCTGACTACAACATCCAGAAAGAGTCAACCCTGCACCTGGTT 7030
>seq1537392
Length=19804
Score = 122 bits (134), Expect = 2e-22
Identities = 153/207 (74%), Gaps = 5/207 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || || ||||| || || || || || || |||||||||||||| | ||| || |
Sbjct 11863 CAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGT--AGAGCCCAATG 11920
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| |||| ||||||| || ||||| ||||| |||| ||| || ||||
Sbjct 11921 ACACCATTGAGAATGTCATGGAAAAGATCCAAGACAAGGAAGGCATCCTTCCTGATCAGC 11980
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| || || |||||| | |||||||| || || | || || |||
Sbjct 11981 AGAGTTTGATCTTTGCTGGGAAACAGGTGAAAGATGGACACACCCTGTCTGACTACAACA 12040
Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128
|||| ||||| || || ||||| ||||
Sbjct 12041 TCCAGAAAGAGTCCACCCTGCA-CTTG 12066
>seq2677557
Length=202
Score = 120 bits (132), Expect = 7e-22
Identities = 136/179 (76%), Gaps = 5/179 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || || || || || || ||||||||||||||||| || |||
Sbjct 185 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGA--GCCCAGTG 128
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||||||||||||||||||| || || || ||||| || || ||||| || |||||||
Sbjct 127 ACACCATCGAGAACGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCC-CCCGACCAGC 69
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
| | || || || || || |||| ||| || ||||| |||||| |||| || |||
Sbjct 68 AGTGTCTGATATTTGCAGGCAAACGGCTGGAGGATGGCCACACTCTTTCCGACTACAAC 10
>seq1799193
Length=4297
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986
|||||| | |||| || ||||| || || ||||| || ||||| ||| ||| || ||
Sbjct 1882 ATTTTCATAAAAATCCTTACAGGGAAGACCATCACTCTTGAGGTTGAACCCTCGGATACA 1941
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
| || || || || ||||||||||| || |||||||| ||||| || || ||| ||
Sbjct 1942 AGAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAACAAAGA 2001
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
|| || || || | || || || ||||||||| ||| | | || || ||| | |||
Sbjct 2002 CTAATTTTTGCTTGCAAGCAACTAGAAGATGGACATACTTTGTCTGACTACAACATTCAA 2061
Query 178107 AAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| | || || || |||||||| ||||||||
Sbjct 2062 AAGAAGTCCACTCTTCATCTTGTGTTGAGACT 2093
>seq2929101
Length=1797
Score = 114 bits (126), Expect = 3e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 177926 AATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--AC 177983
||| || ||||| || || || || || || || ||||| ||||| ||| ||| ||
Sbjct 1148 AATATTGGTGAAGACCCTGACGGGCAAGACCATAACCCTTGAGGTC--AAGTCCAGTGAC 1091
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| |||||| || | || ||||| || |||||||| || ||||||||
Sbjct 1090 ACCATCGAGAATGTCAAAGTCAAAACCCAAGACAAGGAGGGAATCCCACCTGACCAGCAG 1031
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || || | | |||||||| || ||||| | |||||| | ||||| ||| ||
Sbjct 1030 CATCTGATATTTTCGGATAAACAGCTGGAGGATGGCCGCACTCTTTCAGATTACAACATC 971
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| |||| || || ||||| || ||
Sbjct 970 CAGGAAGAGTCCACTCTGCACCTGGT 945
>seq2447078
Length=448
Score = 91.5 bits (100), Expect = 3e-13
Identities = 94/121 (78%), Gaps = 4/121 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || |||||||| | ||||| || || |||||||| ||||| || || |||
Sbjct 318 CAGATCTTTGTGAAAACCTTGACAGGCAAGACCATCACCCTTGAGGTCGA--GCCCAGTG 375
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| |||||| || ||||| ||||| ||||| || || ||||
Sbjct 376 ACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCCCCTGATCAGC 435
Query 178042 A 178042
|
Sbjct 436 A 436
>seq2490240
Length=640
Score = 89.7 bits (98), Expect = 1e-12
Identities = 97/126 (77%), Gaps = 7/126 (6%)
Strand=Plus/Plus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| |||| |||||||| || || || || || || |||||| | ||||
Sbjct 520 AGGTGAAAATGC---AAATCTTCGTGAAGACCCTGACTGGGAAGACTATCACCTTGGAGG 576
Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||| || ||| ||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct 577 TGGA--GCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGGAT 634
Query 178028 CCCTCC 178033
||| ||
Sbjct 635 CCCCCC 640
>seq1292660
Length=282
Score = 89.7 bits (98), Expect = 1e-12
Identities = 130/182 (71%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 177947 AGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--GACACCATCGAGAACGTCAAACAA 178004
||| || || |||||||||||||| |||| || ||||||| ||||| |||||
Sbjct 282 AGGCAAGACCATCACCCTCGAGGT--CAAGCCCAGTGACACCACTGAGAATGTCAAGGCC 225
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|| ||||| | ||| || || ||||| | ||||| || | || || || || || |||
Sbjct 224 AAAATTCAAGCCAAGGAGGGCATCCCACTTGACCAACAGTGTCTGATATTTGCAGGCAAA 165
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| || ||||| | ||||| | || | ||| |||| ||||| || | |||||
Sbjct 164 CAGCTGGAGGATGGCCGCACTCTCTCAGACTGCAACATCCAGAAAGAGTCCATCCTGCAC 105
Query 178125 CT 178126
||
Sbjct 104 CT 103
>seq2955825
Length=1785
Score = 87.8 bits (96), Expect = 4e-12
Identities = 121/166 (73%), Gaps = 5/166 (3%)
Strand=Plus/Plus
Query 177960 ACCCTCGAGGTGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACA 178017
||||| ||||| |||| ||| ||| ||| |||||||||||| || || || | ||
Sbjct 1 ACCCTTGAGGTC--AAGCCCAGTGACAGCATGGAGAACGTCAAAGCCAAAATCCAAGGCA 58
Query 178018 AAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATG 178077
| || || ||||| || ||||||| || || || || || || |||||||| || ||||
Sbjct 59 AGGAGGGCATCCCACCTCACCAGCAGCGTCTAATATTTGCAGGCAAACAGCTGGAGGATG 118
Query 178078 GAAGGACTC-TTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| | |||| | | || || ||| |||| ||||| || || ||||
Sbjct 119 GCTGCACTCGTCTCAGACTACAACATCCAGAAAGAGTCCACCCTGC 164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153895409858170
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