Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq1025 260 2e-64 seq7564 127 2e-24 >seq1025 Length=108756 Score = 260 bits (288), Expect = 2e-64 Identities = 260/337 (77%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| || ||||| ||||| | | | | |||| | |||| |||||||||||||| Sbjct 45003 AGCAGGGCTTCAATGTCTGGCTCGATGTCTATGGTCGGAAAGCGACGGCTGTACCTGCGC 45062 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 |||||| ||||||| |||||||| ||||||||| || ||||| || | |||||||||| Sbjct 45063 ACGGGCACACCGTCAGGACCCACCAGGAACTTCTCAAAATTCCATGCAATGTCGTTGCGG 45122 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| ||||||||| |||| || |||||| || ||| | | ||||||||| Sbjct 45123 CACACCGGAGACCAGATGATGAACTTGGGGTCAGCCATGAGTGCAGTGGCGTCGTCGCTG 45182 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 ||||| |||||||| || || |||||||| |||||||| || || ||||| || ||| Sbjct 45183 GGCGCTGGCAGGGCTTCCCGAAGGAAGGCAAAGAGCGGGTGCGCATGCGCACCATTCACC 45242 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 ||||||||||||||||| | || || |||||||| ||| || || ||||||| ||| Sbjct 45243 TCGCACTTCTCGAAGAGAGTGAAATTGGGCTCGAACCCGCCGCCGGGTCGGACGTACTTG 45302 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 || ||| || ||| || | |||| |||||| |||| Sbjct 45303 AGAGAATTCAGGATTTCTTCGTTCTTGGCGTTCTCCT 45339 Score = 205 bits (226), Expect = 1e-47 Identities = 181/226 (80%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || || |||||||| |||||||| || ||||| ||||| ||||| | || |||| Sbjct 45615 CCTGATGCCCAAACTGGTTGCACGGGAAGCCCAGCACGACCAGGCCCCGGGGCCCGAGGC 45674 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 ||||||||||||| |||||||| ||||| ||||||| |||| | |||||||||||||| | Sbjct 45675 GCCGCTGCAGCTCATTCATCTGGGTGTAGTCCCGGATCGTGGTGCCTCAGAGGGACGCCA 45734 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 | ||||||||||||| ||| |||||| | | |||| | |||||| || || || || | Sbjct 45735 CATTCTCGATGAGCAGCACCTTGCCCCGCAGGGAGCCCAGGCTCACGGGCTCCCCGCCAG 45794 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGATCTGGTCTCTGCCGC 83616 | |||||| |||||||||||||| || || |||| | ||||| Sbjct 45795 CCAGCGGGCGCGCTGAGAAGGCGTATACGGACTGGGTCGCCGCCGC 45840 >seq7564 Length=312589 Score = 127 bits (140), Expect = 2e-24 Identities = 207/288 (72%), Gaps = 9/288 (3%) Strand=Plus/Plus Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468 ||| ||||||| || |||| | ||| || ||| ||| ||||||||| || ||| Sbjct 282606 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCCCGCCTGC 282664 Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528 | ||| || | || || |||||||| || |||||||||| || ||| | ||||||| Sbjct 282665 TGGTGCACCTCTTCCCCGAGCTCTTCACCCACGAGAACCTGCGCAAGCAGTACAACTGCA 282724 Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGC-GCTTGCTCCGGCACTA 50586 ||||||| |||||||| |||| || |||||| ||| | |||| |||| ||||| Sbjct 282725 GCGGCTCCCTGGGCAAGAAGCAG-CTGGACCCGACCCGCATCAAGCTTA-TCCGCCACTA 282782 Query 50587 TGTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGC 50646 |||||| |||| |||| ||| ||||| ||||| |||| ||||| ||| Sbjct 282783 CGTGCAGCTGCTCTACCCCCGGGCCAAAAACGACCGCGTCTGGACTCTGGAGTTCGTGGG 282842 Query 50647 GTGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693 ||||||||||||||||||||||| | |||||| || |||||| Sbjct 282843 CAAGCTGGACGAGCGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 282888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608504828664680