Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq3087 100 5e-16 >seq3087 Length=630865 Score = 100 bits (110), Expect = 5e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960 |||| ||||| | |||| ||||| | || || ||||| || || |||||||| || ||| Sbjct 260048 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACTGTGTTTTTCATCCTGAGG 260107 Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020 || ||| || || ||| ||| || || ||||||||||| | ||| |||||||| | Sbjct 260108 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACGTTG 260167 Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055 | ||||| || ||||| ||| |||| || || || Sbjct 260168 TGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACA 260202 Score = 100 bits (110), Expect = 5e-16 Identities = 104/133 (78%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||| ||||| ||| | ||||| ||||||||||| ||||||||| | || ||||| Sbjct 262089 GCATTTTTCGGAGCCCAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATGGG 262148 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 | | || | ||| || ||| |||| ||||||||| ||||||||||| || || || | Sbjct 262149 TTAACTGCATTTGG-CCCATGGATTCA-AAAGTATCTTTGGTGGAAACGATACCTGACCA 262206 Query 52175 TAATGCAGTTGGT 52187 | ||||| |||| Sbjct 262207 TGTTGCAGCTGGT 262219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922754046354680