Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1562 84.2 3e-11 >seq1562 Length=962321 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | || | ||| || || ||| || || || || || || Sbjct 541083 CCACCACGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTTTTGA-ATGTTCTAGTCAGA 541025 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| || | || || | ||| || |||||||||||||||||||||||||| ||||| Sbjct 541024 CAAAGTACTTCCATATTCCAGTTGCTTGCCAGCAAAAATCAATCTTTGCTGATCAGGAGG 540965 Query 146170 AATTCCTTCTTTATCTTG 146187 |||| || ||||| || Sbjct 540964 AATTTTTTGCTTATCCTG 540947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743169814032640