Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq4342 1627 0.0 seq7036 132 3e-26 >seq4342 Length=357504 Score = 1627 bits (1804), Expect = 0.0 Identities = 1350/1649 (82%), Gaps = 32/1649 (2%) Strand=Plus/Plus Query 107136 AGGGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACCA 107195 ||| || |||||| | ||| ||||||||||||||| | || ||| || ||| ||| | | Sbjct 66552 AGGCTCCTAGGCATGTCTTTCCTGAGGATATTTGTCCAGAGGAGAAATATATTTTTGCTA 66611 Query 107196 TCACTCTGGAGTTGAACTTGATGTTCTGG------ATTAGTTTGTAATTAAAGGCATTTT 107249 ||| | ||||||| |||||||| |||| | |||||||| |||| | ||||||||| Sbjct 66612 TCAGTTTGGAGTTCAACTTGATATTCTTGGGAATGATTAGTTTATAATCAGAGGCATTTT 66671 Query 107250 GTTCTGTCCAAGGATCTCCTCCTCCACCTTGCCTGTGCCCAAACTCTCCTGATCTCCCAT 107309 ||||||| ||||||| | ||| |||| ||||||||||| |||| | | ||||||| Sbjct 66672 GTTCTGTTCAAGGATTCTTTGATCCTCCTTCCCTGTGCCCAATCTCTACCGGCCTCCCAT 66731 Query 107310 CCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGGCCCTG 107369 || | | ||||| | ||||| ||| || ||| || ||| | ||||||| |||| Sbjct 66732 TCCGTCACGATGGTTCAGTGGAGGAAA---CTGTGCTGGCAGCATTACCTGTGGGTCCTG 66788 Query 107370 GGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAATGTGAT 107429 || |||||||||||||||||| ||||| |||||| | |||| ||||| || |||||||| Sbjct 66789 GGATGCTATATGCTGCTGGCCATTGTTGCTCTGAAATTTTCTCTCAGATTAAAATGTGAC 66848 Query 107430 GTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACATGTTG 107489 | || | |||| |||||||||||||| || || || |||| ||||||||| || ||| Sbjct 66849 TTTGACAACCTGGACCTGGAGTCCAGGGAATTTCAAAGCCAGCGCTGTAGGGATATCTTG 66908 Query 107490 TACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGCGAGGG 107549 ||||| |||||| |||||||||| ||||||||||||||| || ||||||| |||||| Sbjct 66909 TACAAGTCCCTGAAACTGCCAGCAATGAGATCCATCAACTGCTCCAGGATCACCCGAGGG 66968 Query 107550 GACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGCGGTCG 107609 ||||||||||||||| | ||||| || || || || ||||| || ||||| |||||| Sbjct 66969 GACCAGGAAGCAGTGCTTCAGGCTCTTCTGGATAAGCTGGAGGTCAAGAAGAAGCGGGAA 67028 Query 107610 CCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAA 107669 ||| |||| | | | |||||| | |||||||||||||||| ||| |||||| || Sbjct 67029 CCTTTCACAGATGCAGACTACCTCCGGGTGACCAGAGACTGTGAGCACTTTAAGGCCGAA 67088 Query 107670 AGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCG 107729 |||||||||||| ||||||||||||| ||||||||| | |||||||| ||||| ||||| Sbjct 67089 AGGAAGTTCATAGAGTTCCCACTGAGCAAAGAAGAGTTGGACTTCCCTATTGCGTACTCT 67148 Query 107730 ATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCT 107789 |||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||||||| Sbjct 67149 ATGGTGGTTCATGAGAAGATTGAAAACTTTGAAAGGCTGCTTCGAGCTGTGTATGCCCCT 67208 Query 107790 CAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTC 107849 |||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||| || Sbjct 67209 CAGAACATATACTGCGTCCATGTGGATGAGAAGTCCCCAGACACTTTCAAAGAGGCAGTG 67268 Query 107850 AAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTT 107909 | ||| |||| ||| |||||||| ||||||||||| |||||||| |||| ||||||||| Sbjct 67269 AGGGCGATTACTTCATGCTTCCCAAATGTCTTCATTGCCAGTAAACTGGTTCCGGTGGTT 67328 Query 107910 TATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGC 107969 ||||||||||||||| | ||||| |||||||||||||| ||||| |||||||||||||| Sbjct 67329 TATGCCTCCTGGTCCCGGGTGCAGGCTGACCTGAACTGCATGGAGGACTTGCTCCAGAGT 67388 Query 107970 TCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAAT 108029 |||||||||||||| ||||| ||||||||||| ||||||||||| || |||||||||||| Sbjct 67389 TCAGTGCCATGGAAATACTTCCTGAATACATGTGGGACAGACTTTCCTATAAAGACCAAT 67448 Query 108030 GCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTA 108089 || |||||||||| |||||||| ||||||||| || | |||||||||||| || ||| Sbjct 67449 GCTGAGATGGTCCAGGCCCTCAGGATGTTGAATGGGAGGAACAGTATGGAATCAGAGACC 67508 Query 108090 CCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTAC 108149 ||| || ||| ||||| | ||||||||||||| ||||||||||| ||||||| || || Sbjct 67509 CCTACTAAGTACAAAACACTGCGCTGGAAATACCACTATGAGGTGAAAGACACATTGCAC 67568 Query 108150 CCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCC 108209 |||||||||| |||||| ||||||||| |||||||| |||||||||||||||||||| Sbjct 67569 ATAACCAGCAAGAAGAAGGATCCTCCCCCTAATAATTTAACCATGTTCACAGGGAATGCC 67628 Query 108210 TATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGA 108269 ||| | ||||| || |||| ||||||||||||||||||| | ||||| ||||||||| | Sbjct 67629 TATATGGTGGCTTCCCGAGACTTTGTCCAACATGTCTTAAAGAACCCCAAATCCCAACAA 67688 Query 108270 CTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAG 108329 ||| |||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||| Sbjct 67689 CTGATTGAATGGGTAAAAGACACCTATAGTCCCGATGAACACCTCTGGGCCACTCTTCAC 67748 Query 108330 CGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATG 108389 ||| | | |||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 67749 CGTACACAATGGATGCCTGGCTCTGTTCCCTACCACCCCAAGTATGACATCTCAGACATG 67808 Query 108390 ACTGCCATCGCCAGGCTCGTCAAGT-GGCAGTACCACGAGGGAGATGTCAGCATGGGGGC 108448 | | |||| |||||||| || |||| ||||| | || |||||||| ||||| | |||||| Sbjct 67809 AGTTCCATTGCCAGGCTAGTTAAGTGGGCAG-ATCATGAGGGAGACGTCAGTAAGGGGGC 67867 Query 108449 GCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGA 108508 || |||||||| |||||||||||||| | | ||| |||| ||||| || || ||||| Sbjct 67868 ACCATATGCACCTTGCTCTGGAATCCACCAGCGGGGTGTCTGTATTTATGGAGCTGGGGA 67927 Query 108509 CCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGA 108568 |||| ||||||| || || ||||||||||| ||||| |||||||||||||| | ||| || Sbjct 67928 CCTGCACTGGATGCTTCAAAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGGTAGA 67987 Query 108569 TGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGACTGA 108628 |||||| || || |||||||||||||||||| ||||| ||||||||||||| |||||||| Sbjct 67988 TGATAATGTTCTTCAGTGCTTAGAAGAGTACTTACGTTATAAGGCCATCTACGGGACTGA 68047 Query 108629 ACTTTGAGCTGCACTGT-------------------GGGCCAGGGACTGTGCCAACATGC 108669 ||| |||| |||||| |||| || |||||||| ||||||| Sbjct 68048 ACTCTGAGACACACTGTGAGAGAATTGCTACTTGTGGGGCAAGAGACTGTGCAAACATGC 68107 Query 108670 CCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGGCATCCC 108729 |||| | | |||| || |||||| |||| ||| |||||| ||||||||||| |||||| Sbjct 68108 CCAGAACTTCCTGGGACACTGTGGGCTGGGCGACCAGGGCTTTGGAATCCATGACATCCC 68167 Query 108730 CCAGGGTCAGAGGGCTGCTTTGATGGGGT 108758 | ||| | || || ||||| | |||||| Sbjct 68168 CTAGGATGAGGGGACTGCTAT--TGGGGT 68194 >seq7036 Length=213198 Score = 132 bits (146), Expect = 3e-26 Identities = 569/886 (64%), Gaps = 29/886 (3%) Strand=Plus/Plus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || ||||||||||| ||| || || || || || || || ||||| ||| | || Sbjct 122489 CCCCTTAGTAAAGAAGAAGCAGAGTTTCCAATAGCATATTCTATAGTGGTTCATCACAAA 122548 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| | || |||||||| | ||| | ||| |||||||| | || || | Sbjct 122549 ATTGAAATGCTGGACAGGCTGCTGAGGGCCATCTATATGCCTCAGAATTTCTATTGCATT 122608 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 |||||||| || || |||| | ||| || || || | || |||| ||||| Sbjct 122609 CACGTGGACAGAAAATCAGAAGAGTCCTTCTTAGCTGCAGTGACGGGCATTGCGTCCTGT 122668 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| || ||||| |||||||| |||||| ||||||||||| || ||| | Sbjct 122669 TTCAGGAACGTCTTTGTGGCCAGTCAGTTGGAGAGTGTGGTTTATGCATCGTGGAGTCGG 122728 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTG--CCATGGAAGT 107985 || || || ||||| ||||| |||| ||| | || |||| | |||| | ||||||| Sbjct 122729 GTTCAGGCCGACCTCAACTGCATGGGGGACCT-CTACAGA-ATGAGTGCACGCTGGAAGT 122786 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 ||||| | ||| ||||| | || || || || || ||||| || || ||| | Sbjct 122787 ACTTAATAAATCTTTGCGGTATGGATTTTCCTATTAAAACCAACCTAGAAATTGTCAGGA 122846 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTG---AGGTACCTTCTGAGTCC- 108101 |||||| || | |||| | ||||| | || | | || | || | ||| Sbjct 122847 AGCTCAAGTCCTTCATGGGTGAAAACAGCCTTGAAACCGAGAAGATGCCCT-----TCCA 122901 Query 108102 -aaaaaaaaTCGCTGGAAATACCGCTATGAG---GTGACAGACACACTGTACCCTACCAG 108157 ||| || | | |||||| | | ||| | || | | | ||| | || | Sbjct 122902 TAAAGAAGAAAGGTGGAAAAAGCAGCATGTGGTTGTTAATGGAAAGCTGGTCAACACGGG 122961 Query 108158 CAAGATGAAGGACCCTC--CCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTT 108215 | | || | | || || ||| || ||| | || |||| | |||||||||| Sbjct 122962 GACTGTCAAAGTGCGTCCTCCACTGGAAA--CACCTCTTTTTTCAGGCAGTGCCTATTTT 123019 Query 108216 GTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTT 108275 |||| | | | | ||| |||| |||| | ||| ||||| | | Sbjct 123020 GTGGTCAGCAGGGAGTATGTGGGGTATGTGCTAGAGGATGAAAAAATCCAAAAGTTTATG 123079 Query 108276 GAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCT 108335 || |||| | ||||| || ||||| || || | ||||||||||| | || | | | Sbjct 123080 GAGTGGGCGCAGGACACATACAGCCCAGATGAGTATCTCTGGGCCACTATCCAAAG-GAT 123138 Query 108336 CCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATGAC 108391 || || | | || ||||| | |||| ||||| ||||| || | || |||||| Sbjct 123139 CCCTGAAGTCCCGGGCTCACTCTCCTTGAGCCA---TAAGTACGACTTGTCTGACATGCA 123195 Query 108392 TGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCC 108451 | | |||||| | ||||||||||||||| | ||||| ||||| | ||| || || Sbjct 123196 GTCGGTTGCCAGGTTTGTCAAGTGGCAGTACTATGAGGGTGATGTTTCTAAGGGTGCTCC 123255 Query 108452 TTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCT 108511 || |||||||| ||| ||||| | | | | ||||||| || ||||| ||| | Sbjct 123256 CTACCCACCCTGCAATGGCATCCACGTGCGCTCGGTGTGCATTTTTGGAGCCGGAGACTT 123315 Query 108512 GTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 | ||||||| || | | || ||| | || || || ||||||||| Sbjct 123316 GAACTGGATGCTGCGTACACACCACTTGTTTGCCAATAAGTTTGAC 123361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348105950270958