Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq98 102 7e-17 seq4625 87.8 2e-12 >seq98 Length=373882 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| |||||| || || || || ||||| || || || ||||| || || || || Sbjct 61354 ACCTCATCTTTGCTGGTATATTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTT 61295 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 |||| || ||||||||| || ||||| || ||||| |||||||||||||| || || Sbjct 61294 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGAGTT 61235 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196 || ||||| ||| ||||| ||||| || Sbjct 61234 CCTGTCTCTGTCTGAGACTCAATGATAGC 61206 >seq4625 Length=314844 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 31199 ATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGT 31258 ||||||||||| || || ||||| || || ||||| || | |||||||| || || | Sbjct 137260 ATTTTCGTAAAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTCAGATACA 137201 Query 31259 GTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCG 31317 | ||| || || || || || ||| |||||||| | || | |||||||| | Sbjct 137200 ATAAAAAATGTAAAGACCAAG-ATCCAGGATAAGGAAGGAATTCCTTCTGACCAGCAAAG 137142 Query 31318 TCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAACATTC 31376 || || || |||||||| || ||||||| | | | ||| | || |||||||||| Sbjct 137141 ACTGATTTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTT----GACTATAACATTC 137087 Query 31377 AAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 |||| || | ||||||||||| || | ||||| Sbjct 137086 AAAAGGAGACCACTCTTCATCTTGTGTTGAGACT 137053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445552616006640