Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq8239 152 4e-32 seq2660 104 2e-17 >seq8239 Length=161809 Score = 152 bits (168), Expect = 4e-32 Identities = 131/162 (81%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || |||| ||| ||||||| ||||| || |||||||||||||||||||| ||||| Sbjct 148501 AGACCGGTGATGTGTGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAACGGC 148560 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || ||||||||||| | |||| |||||||||||||||||||||||| || || Sbjct 148561 ACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 148620 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 ||||| ||||| || | ||||||| ||||| || |||||| Sbjct 148621 ACGTAGAACTGGCAGAGCGCGTGACACGGAGGCAGCGCCATC 148662 >seq2660 Length=345280 Score = 104 bits (114), Expect = 2e-17 Identities = 194/283 (69%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| | || || | || | ||| || ||||| || || | ||| | | Sbjct 297258 TTTAAGGCATCACCCAGACTTTTAGCCACAAAATGAGCTCCTTGTGGAGTTTCCTTGAGT 297317 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 ||||| || | || | ||||||||||| | | ||| || ||||| ||||| ||||| Sbjct 297318 TCTCTACTAAGAACTACATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCAGGAATGGAG 297377 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142 ||||| ||| | | |||||||| || | ||||| || |||| | || || | || | Sbjct 297378 AACCAGGTTTTCCTACCCATAATCACTAGATTCTGTTTACCTTCTACTGAAGAGGTTGTG 297437 Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTT 3202 |||||||| || |||||| | | ||| || || || ||||| |||| ||||| Sbjct 297438 GTCATTTTTTGGAAATACTTGAATTCATTCCTGAGTGGGGGCCAGGGCAGGTCCCCGTTC 297497 Query 3203 TTACCAATTCCTAATTGTTC--ATCAACTGCAACGATGCAGTT 3243 || ||||| || | ||||| || || ||||||||||| Sbjct 297498 TTGCCAATGCCCA--TGTTCTGGGACACAGCGACGATGCAGTT 297538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427575972878160