Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq7597 158 2e-34 seq5373 156 7e-34 seq6839 154 2e-33 seq5198 149 1e-31 seq4357 122 1e-23 >seq7597 Length=170557 Score = 158 bits (174), Expect = 2e-34 Identities = 195/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | ||| || || || ||||| || ||||| || ||||||||| Sbjct 63470 GCCAAGCGTCACCGGAAGGTTCTGCGTGACAATATCCAGGGCATCACAAAACCAGCTATC 63411 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || ||||| || || || ||||||||||| ||||||| | | ||||| || | Sbjct 63410 CGGCGCCTGGCCCGCCGCGGCGGAGTCAAGCGCATCTCTGGCCTCATTTATGAGGAAACC 63351 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | ||| | ||||| ||| || || | || ||| || ||| || ||| Sbjct 63350 CGTGGGGTGCTCAAGGTGTTCCTGGAGAATGTGATTCGGGACGCTGTCACCTACACGGAG 63291 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| ||||| ||||| ||||| ||||||| | ||||| || | ||||| |||||| Sbjct 63290 CACGCAAAACGCAAGACGGTCACGGCCATGGACGTAGTCTACGCGCTTAAACGACAAGGC 63231 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | ||||||||||| ||||| Sbjct 63230 CGTACCCTGTATGGTTTTGGTGGTTAA 63204 >seq5373 Length=168125 Score = 156 bits (172), Expect = 7e-34 Identities = 191/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||||| | || || || |||||||| ||||| || ||||| ||||| Sbjct 62889 CGCTAAGCGTCATCGCAAAGTGCTGCGCGACAACATCCAGGGAATTACTAAGCCTGCTAT 62948 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| || || || |||||||| | ||||| | | ||||| |||| Sbjct 62949 CCGGCGTCTTGCTCGGCGCGGCGGTGTCAAGCGCATTTCTGGCCTCATTTATGAGGAGAC 63008 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| ||||| | ||| | ||| |||||||| ||| ||| || ||| || || Sbjct 63009 CCGCGGAGTTCTGAAGGTTTTCTTGGAGAACGTTATCCGTGACGCTGTCACCTACACGGA 63068 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || || ||||| || || |||||||| | || || || | || ||||| || Sbjct 63069 GCATGCGAAGCGGAAGACGGTGACTGCCATGGATGTGGTGTACGCTCTTAAGCGTCAGGG 63128 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | || || ||||| Sbjct 63129 GCGCACTCTCTACGGCTTTGG 63149 Score = 154 bits (170), Expect = 2e-33 Identities = 184/250 (74%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || || ||||| || || |||||||| |||||||| ||||| ||||||||||| ||||| Sbjct 146343 GACAATATCCAGGGCATTACCAAGCCTGCTATCCGGCGTCTTGCTCGTCGTGGCGGAGTG 146402 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| | ||||| || |||| || |||| ||| | || |||||| | || | || Sbjct 146403 AAGCGTATTTCTGGTCTGATCTACGAGGAGACTCGCGGCGTGTTGAAGGTGTTTTTGGAG 146462 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| |||| |||||| || || || ||||| || || || ||||| || || || Sbjct 146463 AACGTGATCCGCGATGCTGTCACTTACACGGAGCATGCCAAGCGCAAGACCGTTACGGCC 146522 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| |||| ||||| || || | | ||||| || || ||||| Sbjct 146523 ATGGATGTGGTATATGCGCTGAAGCGTCAGGGGCGCACCCTCTATGGCTTCGGCGGTTAA 146582 Query 16700 TCTTCTAATC 16709 || | |||| Sbjct 146583 TCCTTAAATC 146592 Score = 143 bits (158), Expect = 4e-30 Identities = 197/273 (72%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| ||||| | | || || |||| |||||||| || || ||||| || ||||| Sbjct 132998 GCTAAGCGCCATCGTAAGGTC-CTGAGAGACAACATCCAGGGCATTACCAAACCTGCTAT 132940 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| |||||||| || || || || |||||| | ||||| | |||||||||||| Sbjct 132939 CCGTCGCCTGGCTCGACGAGGCGGGGTTAAGCGTATTTCTGGCCTCATCTATGAAGAGAC 132880 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || |||| | || || ||| || |||| ||||| || || ||||| Sbjct 132879 TCGTGGAGTCCTGAAAGTTTTTCTGGAGAATGTCATCCGCGATGCCGTCACTTACACCGA 132820 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || || || || || | ||||| | || || || | || || || || Sbjct 132819 GCACGCCAAGCGCAAAACGGTAACAGCTATGGACGTGGTATACGCGCTTAAGCGACAGGG 132760 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTC 16704 || | | ||||||||||| |||| ||||| Sbjct 132759 GCGCACCCTCTATGGTTTTGGCGGTTAGTCTTC 132727 Score = 134 bits (148), Expect = 2e-27 Identities = 194/274 (71%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || || | | | || || |||||||| || ||||| ||||| || || Sbjct 94790 CGCTAAGCGCCACCGTAAGGTTTTGCGTGACAACATCCAGGGCATCACTAAGCCTGCAAT 94731 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| | ||||||||||| || || ||||| | ||||| | |||||||||||| Sbjct 94730 TCGTCGTTTAGCTCGTCGTGGCGGTGTTAAGCGCATTTCTGGCCTCATCTATGAAGAGAC 94671 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || | || | || || ||| ||| || | || ||| || ||| || || Sbjct 94670 TCGAGGGGTGCTCAAAGTGTTTCTGGAGAACGTGATTCGGGACGCTGTCACCTACACGGA 94611 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||||| ||||| ||||| | ||||| | ||||| || | || || ||||| Sbjct 94610 ACACGCCAAACGCAAGACGGTCACGGCTATGGACGTTGTCTACGCTCTCAAGCGCCAAGG 94551 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 || | |||| || ||||| | |||| |||| Sbjct 94550 ACGCACTCTTTACGGATTTGGTGGCTAATGTTCT 94517 >seq6839 Length=200784 Score = 154 bits (170), Expect = 2e-33 Identities = 197/269 (73%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| ||||| | | |||| |||| |||||||| || || |||||||| || | Sbjct 186350 CGCTAAGCGCCATCGTA-AGGTCTTGAGAGACAACATCCAGGGCATTACCAAGCCCGCCA 186408 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| |||||||| || || |||||||| |||| || | |||||||||||| Sbjct 186409 TTCGGCGTCTTGCTCGTCGCGGAGGTGTCAAGCGGATCTCCGGCCTCATCTATGAAGAGA 186468 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| | ||| ||||| | ||||| ||| ||| |||| || || || ||| || | Sbjct 186469 CTCGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTCATCCGGGACGCGGTCACCTACACTG 186528 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| | ||||| | || || || | || ||||| | Sbjct 186529 AGCACGCCAAGCGCAAGACCGTCACTGCTATGGACGTGGTGTACGCCCTTAAGCGTCAGG 186588 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | || | | |||||||| ||| | ||| Sbjct 186589 GGCGCACCCTGTATGGTTTCGGAGGCTAA 186617 >seq5198 Length=348425 Score = 149 bits (164), Expect = 1e-31 Identities = 191/261 (73%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | | | || || || || ||||| || ||||||||||| || || Sbjct 233289 GCCAAGCGTCACCGTA-AGGTGTTACGTGACAATATCCAGGGCATCACCAAGCCGGCCAT 233347 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || || ||||| || ||||||||| |||| ||| || | || || |||| Sbjct 233348 CCGGCGCCTAGCCCGGCGTGGCGGGGTCAAGCGTATCTCCGGACTGATTTACGAGGAGAC 233407 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || | ||| | ||| | ||| ||| |||| || ||| | || || || Sbjct 233408 TCGTGGGGTGCTCAAGGTGTTCTTGGAGAACGTGATCCGGGACGCTGTAACATACACGGA 233467 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| |||||||| | ||||| || | ||||| ||||| Sbjct 233468 GCACGCCAAGCGCAAGACTGTCACAGCCATGGATGTTGTCTACGCCCTTAAACGCCAAGG 233527 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 |||| | ||||| ||||| Sbjct 233528 ACGTACCCTCTATGGCTTTGG 233548 >seq4357 Length=439355 Score = 122 bits (134), Expect = 1e-23 Identities = 190/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| || || |||| | | | || ||||||||||| || || || ||||| || || Sbjct 145358 CGCTAAACGCCACCGCAAAGTTTTACGTGATAACATCCAGGGTATTACTAAGCCTGCCAT 145417 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || | ||||||||||| || || ||||| ||||||| | | || || || | Sbjct 145418 CCGCCGCTTAGCTCGTCGTGGAGGCGTTAAGCGCATCTCTGGCCTTATTTACGAGGAAAC 145477 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| |||| || | | || |||| ||| ||| | || || || Sbjct 145478 GCGCGGAGTTCTTAAGGTCTTTCTGGAAAATGTGATCCGTGACGCTGTTACTTACACGGA 145537 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| ||||||||||||||||| ||||||| | || || || | || || || || Sbjct 145538 GCACGCCAAACGTAAGACTGTCACGGCCATGGACGTGGTTTACGCGCTCAAGCGCCAGGG 145597 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 || | | ||||| || || | |||| || Sbjct 145598 TCGCACCCTCTATGGCTTCGGCGGCTAATATT 145629 Score = 122 bits (134), Expect = 1e-23 Identities = 171/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || || |||||||| || |||||||| || || ||||| || ||||| || ||||| Sbjct 184479 TCTGCGCGACAACATCCAGGGCATCACCAAACCTGCGATCCGGCGCCTGGCCCGCCGTGG 184420 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || |||||| |||| || | |||| || |||| ||| | || | ||| | || Sbjct 184419 CGGCGTTAAGCGTATCTCCGGCCTCATCTACGAGGAGACTCGCGGGGTGCTTAAGGTGTT 184360 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | ||| |||| || || || ||| ||||||||||| || || ||||| || Sbjct 184359 CCTGGAAAACGTGATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACGGT 184300 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| | ||||| | ||||| || | || || || || |||| | || ||||| || Sbjct 184299 CACTGCTATGGACGTGGTCTACGCGCTCAAGCGCCAGGGTCGTACTCTGTACGGTTTCGG 184240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79040120783331