Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6496 104 2e-17 seq2283 100 2e-16 >seq6496 Length=1068356 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| |||||||| || || ||||||||||||| || ||| | || Sbjct 914143 CAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATC 914202 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || || || ||| | || |||| ||| || || || | |||||| ||||| Sbjct 914203 TTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTC 914262 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||||| ||| || | | | ||||||| |||||| |||| ||||||| Sbjct 914263 TTGGATCTTTGC--CTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATG 914320 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| || || || || |||||||| Sbjct 914321 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 914355 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | || |||| ||||| |||||||| || || ||||||||||||| Sbjct 914356 CCCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 914415 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | || |||| || || || ||| | || |||| ||| ||||| || Sbjct 914416 CAAGGTGCGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 914475 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||| ||||| || ||||| ||| || | | | ||||||| |||||| Sbjct 914476 GATGCCCTCCTTGTCTTGGATCTTTGC--CTTGACATTCTCGATGGTGTCGCTGGGCTCG 914533 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||| || || ||||| || || || || ||||||||| Sbjct 914534 ACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATT 914584 >seq2283 Length=901578 Score = 100 bits (110), Expect = 2e-16 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || ||||| || || ||||||||||||| | || | || Sbjct 857273 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCT 857214 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || |||| ||| ||||| || | ||| ||||| || Sbjct 857213 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 857154 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | ||||| | ||||||| |||| |||||||| Sbjct 857153 TGGATCTTGGC--CTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 857096 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || |||||||| || || ||||| || ||||||||| Sbjct 857095 TCTTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTTG 857058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404898581737330