Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4939 122 6e-23 seq6054 113 3e-20 seq2193 109 4e-19 seq10264 104 2e-17 seq13899 100 2e-16 seq2125 91.5 1e-13 seq10391 84.2 1e-11 seq5046 84.2 1e-11 >seq4939 Length=37399 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 5814 AAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 5755 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 5754 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 5720 >seq6054 Length=6645 Score = 113 bits (124), Expect = 3e-20 Identities = 79/90 (88%), Gaps = 5/90 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| |||||||| ||||| || |||||||| Sbjct 1454 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 1395 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGAT 25986 | |||| ||||||||||||||||||||||| Sbjct 1394 TCATCCATTCATGCGCGTCACTAATTAGAT 1365 >seq2193 Length=758271 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||| ||||||||||||||||||||||| |||||||| | ||| || |||||||| Sbjct 425330 AAGCTTGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTGGGGACAGTGGGAATCTCGT 425271 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||||||||||||||||||| || Sbjct 425270 TCATCCATTCATGCGCGTCACTAATTAGATGAGGA 425236 >seq10264 Length=1887 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 1422 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGT 1363 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1362 GCCGGTATTTAGCCTTA 1346 >seq13899 Length=5161 Score = 100 bits (110), Expect = 2e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | Sbjct 1747 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGTGC 1806 Query 20009 TAATATTTAGCCTTA 20023 |||||||||||| Sbjct 1807 CGGTATTTAGCCTTA 1821 >seq2125 Length=1118495 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||||||||||||| || | | |||| ||||| || |||||||| Sbjct 571621 AAGCCCATTCCCTTGGCTGTGGTTTTGCCGGGTCGTAGGTAGGGACAGTGGGAATCTCGT 571562 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 | |||| ||||||||| |||||| ||||||||| Sbjct 571561 TCATCCATTCATGCGCATCACTATTTAGATGAC 571529 >seq10391 Length=4239 Score = 84.2 bits (92), Expect = 1e-11 Identities = 73/91 (80%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 25906 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAAT 25960 ||| ||||||||||||||||||||| |||||| |||| || | ||||||| || Sbjct 1484 CCGCTCCCTTGGCTGTGGTTTCGCTGCATAGTAAGTAGGAACAGTGGGATTCTCGTTCAT 1543 Query 25961 CCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || ||||| || |||||||||||||||| || Sbjct 1544 CCATTCATACGAGTCACTAATTAGATGAGGA 1574 >seq5046 Length=4847 Score = 84.2 bits (92), Expect = 1e-11 Identities = 73/91 (80%), Gaps = 5/91 (5%) Strand=Plus/Minus Query 25906 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAAT 25960 ||| ||||||||||||||||||||| |||||| |||| || | ||||||| || Sbjct 767 CCGCTCCCTTGGCTGTGGTTTCGCTGCATAGTAAGTAGGAACAGTGGGATTCTCGTTCAT 708 Query 25961 CCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || ||||| || |||||||||||||||| || Sbjct 707 CCATTCATACGAGTCACTAATTAGATGAGGA 677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334790579421977