Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq194 105 7e-18 seq1400 96.9 4e-15 >seq194 Length=1934172 Score = 105 bits (116), Expect = 7e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| ||||| | || || | ||||||||||||||||||||| ||||| || ||| Sbjct 226991 TCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 226932 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||||||||| || || |||||||| || ||||| || |||| |||||| Sbjct 226931 AAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACAACACGTTC 226879 Score = 104 bits (114), Expect = 3e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| ||||| ||||| || | ||| ||||||||||||||| | || ||||| Sbjct 225195 GAATCTTTAATGTAAGTATCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATG 225136 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||||||||| || |||||||| | |||||| || ||||| |||||||| ||||| | Sbjct 225135 GCAATTTGGAAGCCATAGAAACAGCGAGCTTCTGTAATCTGAACTTCTTGGCTAAATCGC 225076 Query 93473 TCTAC 93477 || || Sbjct 225075 TCCAC 225071 >seq1400 Length=560904 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/241 (69%), Gaps = 5/241 (2%) Strand=Plus/Minus Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAA 93340 || ||||| || || || ||||| | |||||| | ||||| || || || || || | Sbjct 277771 AAGGCCCAGTCTGCCTTCTTCTTCACACAAGGCATCGTTTCAATGGCATTGAAGAGAAAT 277712 Query 93341 TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGG 93400 || | || | |||||| |||| | || || ||| |||||| |||||||| Sbjct 277711 TCCCTTTCTTTGGAATCTTTAATGTGTCCAT-GAGGAACT----ATACATCTCAGAATGT 277657 Query 93401 ACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCT 93460 | || | ||| ||||||||||| || |||||||| ||||| || ||||| || ||| Sbjct 277656 ATGTTTTACATGGCAATTTGGAAGCCATAGAAACAGTGGGCTTCTGTAATCTGAACGTCT 277597 Query 93461 TGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCC 93520 || ||| | ||| || || ||||| ||| | || | | ||||||||| |||||| Sbjct 277596 TGGCTAAAACGCTCCACTCAGTTGTCATTTACTCTGCCGTTGCTTGCTGCAAAGAAAGCC 277537 Query 93521 A 93521 | Sbjct 277536 A 277536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556593736521080