Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6496 125 6e-24 seq2477 105 6e-18 seq101 82.4 6e-11 >seq6496 Length=1068356 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | ||||| || || |||| || || || || ||| Sbjct 914356 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCCAG 914297 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| ||| | || || |||| ||| || |||||||||||||| || || || ||||| Sbjct 914296 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGATCA 914237 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| || || ||| | || ||| |||||| | ||||| ||||| Sbjct 914236 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAA 914177 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || ||||| |||||| | || || || |||| ||| | |||||| Sbjct 914176 CATCCAGAAAGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGGT 914128 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || ||| | Sbjct 914583 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGC 914524 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || |||||||||||||| || || || || || Sbjct 914523 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCAG 914464 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || |||||||| || ||| | || ||| |||||| | ||||| |||||| Sbjct 914463 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAAC 914404 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| |||||| Sbjct 914403 ATCCAGAAAGAGTCCACC 914386 >seq2477 Length=1236505 Score = 105 bits (116), Expect = 6e-18 Identities = 144/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| ||||| || || || | | || || || |||| ||||| || || ||| Sbjct 1059912 AGATGCAGATTTT-GTGAAGACCCTGATGGGCAAGACCATCACCCTTGAGGTCGAGCCCA 1059970 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| || || ||||| ||||| |||||||||||||| || |||| || | Sbjct 1059971 GTGACACCACTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACTTGACC 1060030 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | || |||||||| ||||||||| | |||||| || ||| | |||||| || Sbjct 1060031 AGCAGCACCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCACACTCTTTCCGATCCCA 1060090 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||||| ||||| ||| || Sbjct 1060091 GCATTCAGAAAGAGTCCGCC 1060110 >seq101 Length=343205 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380 || || ||||| || || || ||||| |||||||| ||||||||| | |||||| |||| Sbjct 288824 GGCATCCCACCTGACCAGCAGCGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGC 288765 Query 22381 ACCGTCTCCGATTACAACATTCAAAAAG 22408 || | || |||||||||||||| |||| Sbjct 288764 ACTCTTTCTGATTACAACATTCAGAAAG 288737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419531736105355