Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2283 127 5e-24 seq4625 104 6e-17 seq4169 102 2e-16 >seq2283 Length=901578 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||||| || ||||| || ||||| | || || ||||| ||| Sbjct 857252 TCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAG 857193 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| ||||||||||||||||| || || ||||| || Sbjct 857192 ATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTC 857133 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| || Sbjct 857132 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACA 857073 Query 288463 AATATCTGCATTATG 288477 || || |||||| || Sbjct 857072 AAGATTTGCATTTTG 857058 >seq4625 Length=314844 Score = 104 bits (114), Expect = 6e-17 Identities = 153/215 (71%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| | || ||||||| ||| | || ||||| || |||||||| | || ||| Sbjct 137053 AGTCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTC----AAAGTACGT 137108 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCT 288372 || ||||| | ||| || || || || ||||| | |||| | |||| || |||||| Sbjct 137109 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAA---GGAATTCCT 137165 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 || ||||||||||| || | || || |||| ||| | ||| | ||| || | ||| Sbjct 137166 TCCTTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGA 137225 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATAT 288467 ||||| |||||||| || || || || ||||| || Sbjct 137226 GTGATGGTCTTCCCTGTAAGGGTTTTTACGAAAAT 137260 >seq4169 Length=151675 Score = 102 bits (112), Expect = 2e-16 Identities = 162/228 (71%), Gaps = 7/228 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGA-GTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||| |||| |||| | | ||||||| ||| || ||||| || || ||||| Sbjct 18102 CCACCACGGAAGTCTCAACGCAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAA 18161 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | |||| ||| ||||| | ||| || || || || ||||| | || ||| || || Sbjct 18162 GTACGTG--TCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCT-TGCTGA---TCAGG 18215 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| ||||||||||| || || || || |||||| | | ||| | ||| || Sbjct 18216 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCGAC 18275 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||| |||||||| || || | || ||||| |||||||| Sbjct 18276 CTCGAGAGCGATAGTCTTCCCTGTAAGGGCTTTTACGAAAATCTGCAT 18323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179074508807826