Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2283 136 4e-27 seq6496 113 5e-20 seq4625 98.7 1e-15 seq4169 86.0 6e-12 >seq2283 Length=901578 Score = 136 bits (150), Expect = 4e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| ||||| || |||||||| || | | ||||| | ||||| ||||||||||| Sbjct 857258 GTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCT 857199 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| || || || |||||||| || || || || ||| Sbjct 857198 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 857139 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || |||| || ||||| || | || | |||||||||||||| || Sbjct 857138 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 857079 Query 64427 TTTACGAAAATTTGCATTTT 64446 || || || ||||||||||| Sbjct 857078 TTCACAAAGATTTGCATTTT 857059 >seq6496 Length=1068356 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || |||||||| || | | ||||||| | ||||| |||||||| || Sbjct 914159 GTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTGCTTCCCA 914218 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| |||||| || || || || || || || ||||| || ||| ||| Sbjct 914219 GCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTCTTGGATCTTTGCCTTG 914278 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || || | || || || || | || | |||||||||||||| || Sbjct 914279 ACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 914338 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 914339 TTCACGAAGATCTGCAT 914355 >seq4625 Length=314844 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| || | || ||||||||||| || || | || || | Sbjct 137055 TCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTC----AAAGTACGTCC 137110 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || |||||||| ||| |||| || | |||||||| | |||||||||||| || Sbjct 137111 ATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTTCCTT 137170 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||||||| | | |||||| || || || | | ||| | Sbjct 137171 ATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAGTGAT 137230 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAAT 64437 |||||| || || | |||||||||||||| Sbjct 137231 GGTCTTCCCTGTAAGGGTTTTTACGAAAAT 137260 >seq4169 Length=151675 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/234 (69%), Gaps = 11/234 (5%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAA-TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTG 64274 ||| || || || ||| | | | ||||||| || || || |||||||||||||| || Sbjct 18101 ACCACCACGGAAGTCTCAACGCAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC-- 18158 Query 64275 CGACGGTGCGCG--CGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGG 64332 | || || | | ||||| || |||||||| ||| |||| || | ||||| || Sbjct 18159 --AAAGTACGTGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCT-TGCTGATC--- 18212 Query 64333 AGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTC 64392 |||||||||||| || || || || || ||||||| || |||||| || || Sbjct 18213 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTC 18272 Query 64393 CACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || | || | ||||| || || | | |||||||||||| ||||| || Sbjct 18273 GACCTCGAGAGCGATAGTCTTCCCTGTAAGGGCTTTTACGAAAATCTGCATCTT 18326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499405176599480