Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq11757 390 5e-104 seq15959 172 2e-38 >seq11757 Length=14080 Score = 390 bits (432), Expect = 5e-104 Identities = 282/337 (84%), Gaps = 37/337 (11%) Strand=Plus/Minus Query 18101 GCGGCTGCGCGTCGCGCTACGCCCGCGTGACGCCCTATCGCGGCCGCGTGGTGCGGATCA 18160 |||||||||| |||| |||||| || ||| || || |||||||||||||||||||||| Sbjct 13197 GCGGCTGCGCCTCGCACTACGCGCGGGTGTATCCGTACCGCGGCCGCGTGGTGCGGATCA 13138 Query 18161 GCGTCGGCGTGTCCTACAACTACTGACCAACGCAACACGAAGGGGAACGACGATGGCACG 18220 |||||||||||||||||||||||||||||||||||| | ||| | Sbjct 13137 GCGTCGGCGTGTCCTACAACTACTGACCAACGCAACGCCAAGNG---------------- 13094 Query 18221 AATCAAGGCTGACGAGGTTTGCGTGGGCGACAAGATCGTCCGCCCCGGCGATGCGATTTA 18280 ||||||||||||||||||||||||||||||||||||||| Sbjct 13093 ---------------------CGTGGGCGACAAGATCGTCCGCCCCGGCGATGCGATTTA 13055 Query 18281 CGAAGTCGTGGCGCTCGAATGGTTCACGGTCACGGTACATCTGCATTGCGTCGAGCGCCG 18340 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 13054 CGAAGTCGTGGCGCTCGAATGGTTCACGGTCACGGTGCATCTGCATTGCGTCGAGCGCCG 12995 Query 18341 CGTGGCCAAGCTCGACCGACACGAGGCGTTTTCGTACAACCGCGACGAAAAGGTCGAGGT 18400 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 12994 CGTGGCCAAGCTCGACCGACACGAGACGTTCTCGTACAACCGCGACGAAAAGGTCGAGGT 12935 Query 18401 TGCCTGACAACCGCTCCCGCTACAGGAGAAAGACGTG 18437 ||||| |||||||||||||||||||||||| ||| || Sbjct 12934 TGCCTAACAACCGCTCCCGCTACAGGAGAACGACATG 12898 >seq15959 Length=2168 Score = 172 bits (190), Expect = 2e-38 Identities = 119/135 (88%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 17823 AGGAGAGATCATGGAAACGTTGCATGTCGAGCGCCGCGTCACGCGCAAGTTTGTGGGCAC 17882 |||||| | ||||| ||||||||||| | ||| || || |||||||||||||| ||||| Sbjct 2045 AGGAGAAACAATGGATACGTTGCATGTTGCGCGTCGTGTTACGCGCAAGTTTGTCGGCAC 1986 Query 17883 CTTCCGCCACCTGGACGCATGGGAAGGTCTGGGCACGATCCGGCACACGCCGTTCCGCAA 17942 ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| Sbjct 1985 GTTCCGCCACCTGGACGCATGGGACGAGCTGGGCACGATCCGGCACACGCCATTCCGCAA 1926 Query 17943 GGTGTACGACCCGGC 17957 ||||||| ||||||| Sbjct 1925 GGTGTACAACCCGGC 1911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200469417086412