Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4056 143 1e-28 seq3902 129 2e-24 seq4625 109 2e-18 seq1562 105 3e-17 seq1403 100 1e-15 seq473 93.3 2e-13 seq573 91.5 6e-13 seq4058 89.7 2e-12 seq566 84.2 9e-11 >seq4056 Length=244935 Score = 143 bits (158), Expect = 1e-28 Identities = 454/698 (65%), Gaps = 13/698 (2%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || || || || || | || ||||||| || || || || || | ||| | || || Sbjct 177139 GCCATAGGCATCGACTTGGGCACCACCTACTCGTGCGTGGGGGTGTTCCAGCACGGCAAG 177198 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT----TT 451029 || || || || || |||||||| || || || || || || | || || || Sbjct 177199 GTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCC--CA--GCTACGTGGCCTT 177254 Query 451030 TACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCA 451088 ||| || ||||||| || | || | || || || | | | |||| ||| || Sbjct 177255 TACAGACACAGAAAGGCTCATTGGAGATGCCGCCAAGAACCA-GGTAGCCATGAATCCCC 177313 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 | ||||| || | |||||| |||||| | |||||| | | | | ||||| | ||| | Sbjct 177314 AGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGC 177373 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 || ||| | ||| | | ||| | | || | ||| || |||||| || | | | Sbjct 177374 AATCAGATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGAAAACCGAAGGTGC 177433 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268 || || ||||| || | |||| |||| ||||| ||||| || || ||||| | Sbjct 177434 TCGTGTCCTACAAAGGGGAGAATAAAGCTTTCTACCCTGAGGAAATCTCTTCGATGGTAC 177493 Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328 | ||||| ||||| || || || || | | | || | || || || |||| || | Sbjct 177494 TGACTAAGATGAAGGAGACTGCTGAGGCTTTTTTGGGCTACCCTGTCACGAATGCTGTGA 177553 Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 | || || || || ||||||||||| | |||||||| || || || |||||||| | Sbjct 177554 TCACAGTGCCAGCCTATTTCAATGACTCTCAACGGCAGGCTACAAAGGATGCAGGTGTGA 177613 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 |||| || | ||||| || |||| || |||||||| ||||| ||||| | || || | Sbjct 177614 TTGCGGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCCTACG 177673 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | ||| || | || || ||| | || | | | |||||| | ||||||| Sbjct 177674 GTTTAGATAA---AGGAGGTCAAGGAGAGCGACATGTCCTGATCTTTGATCTCGGTGGAG 177730 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 | || |||| || | || | || || |||||| | ||||| |||||||| || Sbjct 177731 GTACATTTGATGTGTCCATCCTGACCATAGATGATGGGATTTTTGAGGTAAAGGCCACGG 177790 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 ||| || || || || || || || || |||| ||| Sbjct 177791 CTGGCGACACCCACCTGGGTGGGGAGGACTTTGACAAT 177828 >seq3902 Length=329337 Score = 129 bits (142), Expect = 2e-24 Identities = 833/1316 (63%), Gaps = 45/1316 (3%) Strand=Plus/Minus Query 451195 AAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAAT 451254 || |||| | | |||||| | || || || || || |||| ||| |||||| || | Sbjct 124071 AAGGCCCAAGGTCCAAGTAGAATACAAGGGAGAGACAAAAAGTTTCTATCCTGAGGAGGT 124012 Query 451255 TTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGT 451314 |||||||||||||| || || ||||| ||||| | ||| ||| |||| | || Sbjct 124011 GTCATCTATGGTTCTGACAAAGATGAAGGAAACTGGAGATGCCTATCTTGGAAAGACTGT 123952 Query 451315 TACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAA 451374 ||| ||| || | || || || ||||| || ||||| | || | || || || || Sbjct 123951 TACCATTGCTGTGGTCACAGTGCCAGCTTACTTTAATGACTCTCAGCATCAGGCTACCAA 123892 Query 451375 AGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGC 451434 ||||| ||| |||||| || | ||||||||| | ||||| |||||||| || || | Sbjct 123891 AGATGATGGAACCATTGCTAGTCTTAATGTTCTTAGGATTATAAATGAACCAACTGCTAC 123832 Query 451435 TGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATT 451494 |||| || ||| | ||| || || | || |||| |||| | | | || Sbjct 123831 TGCTACTGCTTATAGCTTAGACAA---CAAGGTTGGAGCTGAAAGAAATGTGCTGATCTT 123775 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 ||| | || || || ||| |||| || | || | ||||| ||||| | ||||| Sbjct 123774 TGACCTAGGAGGTGGCACTTTTGATGTGTCAATCCTCACTATTGAGGATGGAATCTTTGA 123715 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 || || | || | | ||||| || |||| || ||||| |||| || ||| || Sbjct 123714 GGTCAAATCTACAGCTAGAGATACACACTTAGGTGGAGAAGACTTTGACAACCAAATGGT 123655 Query 451615 GGAATGGTTGAAAACTGATGTTCAACG--AAAACTAA-AAGTAGATATTTCTACTAACCA 451671 | || | |||| |||||| | || |||| ||| || || | || Sbjct 123654 CAACCATTTTATTGCTGA-GTTCAAGGGCAAGCCTAAGAAG--GACATCAGTGAGAATAC 123598 Query 451672 AAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTT-CAA 451730 || ||| | || | || | || | ||| | ||||| ||| || || || Sbjct 123597 AAGAGCCATCCGATGCCTCCATACTGCTTGTGAACATGCTAAGTATACTCTGTCTTCCAG 123538 Query 451731 CACAAACTACTAGTATAAACATTGAT--AGTTTAGTTGATGGAATGGATT---ATGCTAC 451785 ||| || | ||||| |||||| | |||| ||| ||||| || | |||| | Sbjct 123537 CACCAA-GGCCAGTATTGTGATTGATTCACTTTA--TGAAGGAATAGACTTCCATGCCTC 123481 Query 451786 TACTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACGGGTA--ATG 451843 || |||| |||| |||||||| ||||| | | | || | | | || | | Sbjct 123480 CAC---TACCTGTGCCCAATTTGAA-GAATTTAATGCTG-ATCTGTTCCGTGGCACCCTA 123426 Query 451844 AAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATA-AAATTGATGAAAT 451902 | ||||| || ||| | || || | | ||| ||| ||| | | ||| |||| || Sbjct 123425 GACCCTGTAGAGGAAGCCCTTCAAGA-TGTCAAACTAGACAAGTCACAGATTCATGACAT 123367 Query 451903 TGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGA---TATGT-TGTCTTCTT 451958 ||| || || || ||| ||| | || || || |||||| | | ||| | |||||| Sbjct 123366 TGTCCTGGTTGGTAGTTTTACCTGTATCCCCAAGATTCAAAAGCTTCTGTAAGACTTCTT 123307 Query 451959 ATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTG 452018 | |||||| |||| ||||||| | || |||||||| ||| |||| |||| || Sbjct 123306 CAAT----GGAAAAGAACTGAGTAAGAGTATCAACCCTGATGAGGCTTTTGCTTATGCTG 123251 Query 452019 CTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGATATTC 452075 | || || |||| || || || | | ||| | ||| || | |||| | | Sbjct 123250 CAGCTGTCCAAGTGGCCATCCTGTC---TGAAGAGAAATCTGAGAATGTTCAAGATTTGC 123194 Query 452076 TGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTA 452135 | | | ||||| || ||||| |||||||| ||||||| ||||||||| | |||||| Sbjct 123193 TACTCTTGGATGTCACTCCTCTTTCTCTTGGTATTGAAACTGCTGGTGGAGTTATGACTG 123134 Query 452136 ATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAA 452195 | ||||| | ||| | |||||| || ||| | || || | ||| Sbjct 123133 CACTCATTAAGTGCAACACTACCATTCCTACCAAGCAGACATAGACCTTCACTACCTACT 123074 Query 452196 GTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAG 452255 ||| ||||| || ||||| ||||| || | ||||| ||| | | | ||| | Sbjct 123073 CTGACAACCAGCCTGGTGTGCTCATTCAGGTTTACGAAGGTGAATGGGTCAGGACCAAGG 123014 Query 452256 ATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTC 452315 |||| || || || | ||| || || ||| ||||| |||| | || || Sbjct 123013 ATAACAACTTGCTTGGCAAGTTTGAACTCACAGGCATACCTCC--TGCCCTGTGGTGTTC 122956 Query 452316 CTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTG 452375 |||| ||||| | || | || ||||||| ||||| ||||| ||||| ||| || | Sbjct 122955 CTCATGTTGAAGTCACTTTCAATATTGATGCCAATGGCATTCTCAATGTCTCTGCTGTGG 122896 Query 452376 A-AAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCT 452434 | | | || | |||| | | || ||||| || ||| | || || ||||| Sbjct 122895 ATGAGAGCA-CCAGAAAGGAAAATAAGATTACCATCACTGACGACAATGGGCGTTTGAGC 122837 Query 452435 AAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 || ||||| |||||| ||||| | ||||| || || | | | ||| ||||| Sbjct 122836 AAGGAAGACATTGAATGTATGGTCCAGGAAGCTGAGAAGTACTAAATTGAAGATGA 122781 >seq4625 Length=314844 Score = 109 bits (120), Expect = 2e-18 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 391055 TATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAA 391114 ||||||||| ||||| || || || || || || ||||| | |||||| | || |||| Sbjct 137261 TATTTTCGTAAAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTCAGATAC 137202 Query 391115 CATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACG 391174 || || | | || || || || |||||||||||||||||| |||| || ||| | Sbjct 137201 AATAAAAAATGTAAAGACCAAGATCCAGGATAAGGAAGGAATTCCTTCTGACCAGCAAAG 137142 Query 391175 TTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGA 391234 | ||||| | || || ||||| ||||||||| | ||||| || ||||| ||| | Sbjct 137141 ACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTATAACATTCA 137086 Query 391235 TAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||||| | || ||||| | || || ||||| Sbjct 137085 AAAGGAGACCACTCTTCATCTTGTGTTGAGACT 137053 >seq1562 Length=962321 Score = 105 bits (116), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| | ||||| || || || || || | | ||| | |||||| | || Sbjct 540857 ATGCAGATTTTCATAAAAACCCTTACAGGGAAGACCACCATTCTCAAGGTTGAACCCTCA 540916 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| | ||| | | || || || || |||||| || ||||||||||||||| Sbjct 540917 GATACAACAGAAAATGTAAAGGTCAAGATCCAGGATAAGCAAAAAATTCCTCCTGATCAG 540976 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || ||||| | || || ||||| ||| ||||||| |||||| | || || || Sbjct 540977 CAAAGATTGATTTTTGCTGGCAAGCAACTGGAATATGGAAGTACTTTGTCTGACTAGAAC 541036 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || |||||| | || || ||||| Sbjct 541037 ATTCAAAAGGAGTCCACTCTTCACCTTGTGTTGAGACT 541074 >seq1403 Length=783579 Score = 100 bits (110), Expect = 1e-15 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || || |||||||||||||| ||||| |||||||| Sbjct 625812 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAAGCAACC 625871 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||||||||| | |||||| | | || || ||||| || Sbjct 625872 AAAGATGCTGGAACTATTGCTGGACTGAATGTTATGAGGATCATCAATGAGCC 625924 >seq473 Length=176905 Score = 93.3 bits (102), Expect = 2e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||| ||||| || || || |||| ||||||| |||||| | ||||||||||| Sbjct 160525 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGAGTAATTAATGAACCC 160584 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 ||||| |||||||| || ||||| |||| |||||| |||| Sbjct 160585 ACAGCTGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 160625 >seq573 Length=363558 Score = 91.5 bits (100), Expect = 6e-13 Identities = 139/194 (72%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 391077 GGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAA 391136 || || || || ||||| | |||||||| | |||| || ||| | | || || Sbjct 312125 GGGAAGACCATCACTCTCAAGGTTGAATCCTTGGATATAATAGAAAATGTAAAGGCTAAG 312066 Query 391137 ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCT--CAGGGAAAC 391194 || || ||||| |||||||||||||||||||| ||| | ||||||| | | || || | Sbjct 312065 ATCCAGGATAATGAAGGAATTCCTCCTGATCAGCAAAGACTAATTTTTTTGCTGGCAAGC 312006 Query 391195 AACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGA-TGCAACACTTCAC 391253 |||| |||||||| | ||||| ||||| || ||| | ||||| ||| || ||||| Sbjct 312005 AACTGCAAGATGGATGTACTTT----GATTACAACATTCAAAAGGAGTGC-ACTCTTCAT 311951 Query 391254 TTAGTATTAAGACT 391267 | || || ||||| Sbjct 311950 CTTGTGTTGAGACT 311937 >seq4058 Length=432559 Score = 89.7 bits (98), Expect = 2e-12 Identities = 268/409 (66%), Gaps = 6/409 (1%) Strand=Plus/Minus Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 |||||| | || ||||| || || |||| || || | | || |||||||||||| Sbjct 202969 CAAGTAGAATACAAAGGAGAGACAAAAAGGTTCTATCAACACAAGATGTCATCTATGGTT 202910 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | || |||||||| |||| ||||| | |||| | || || |||| || Sbjct 202909 TTGACAAAAATGAAGGAAATCACAGAAACTTGTATTTGGAAGAATGTCACCAATGCTGTG 202850 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA--C 451385 | | | || ||||| || |||||| | || | || || | |||||||| ||| | Sbjct 202849 GTCATAGCACCAGCTTACTTTAATGATTCTCACCATCAGGCTAGCAAAGATGCTGGAACC 202790 Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445 || |||||||| | ||||| | | ||||| ||||| || || || ||||| | || | Sbjct 202789 AT-TTGCTGGTCTCAATGTATATAGGATTATCAATGAGCCAACTGCTTCTGCTATTGCTT 202731 Query 451446 ATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 || |||| || || ||| | || |||| |||| | | | ||||| | || | Sbjct 202730 AT-GACTTAGACAA--AAAGGTTGGAGCTGAAAGAAATGTGCTGATCTTTGACCTAGGAG 202674 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAA 451565 | || ||| |||| || || || | ||||| |||| | ||||| || || | | Sbjct 202673 GTGGCACTTTTGATGTGTCGGTCCTCACTATTGAGGATGAAATCTTTGAGGTCAAATCCA 202614 Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 | ||| ||||| || |||| || ||||| |||| ||| ||| || Sbjct 202613 CAGCTGGAGATACCCACTTAGGTGGAGAAGACTTTGACAATCAAATGGT 202565 >seq566 Length=636019 Score = 84.2 bits (92), Expect = 9e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| || ||||| ||||| | ||| ||||||| Sbjct 529557 GCAGTTGGTATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAAG 529616 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCC 451014 ||||| || || || ||||| || ||| ||||| ||||| Sbjct 529617 GTAGAGATAATTGCCAATGATCAGGGAAACCGAACCACTCC 529657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974747181905636