Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6496 114 8e-21 seq2283 93.3 3e-14 seq2477 91.5 1e-13 >seq6496 Length=1068356 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | || |||||||| | ||| |||||||| ||||| ||||| || Sbjct 914129 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 914188 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | | || |||| |||||||| || || ||||| || || | ||||| || | || Sbjct 914189 AAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGG 914248 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | ||||||||||| ||||| ||||| || || || | || | || ||| | Sbjct 914249 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGAC--ATTCTCGATGGTGTCGCTGGGCTCGA 914306 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||| ||||| || || || || |||||||| ||||||||||| Sbjct 914307 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 914355 Score = 109 bits (120), Expect = 4e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||| ||||| ||||| || | | | || |||| ||| Sbjct 914375 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCC 914434 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || | |||||||| | || | ||||||||||| Sbjct 914435 AGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 914494 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| ||||| || || || | || | || ||| || |||| ||| ||||| | Sbjct 914495 ATCTTTGCCTTGAC--ATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCT 914552 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || |||||||| ||||||||||| Sbjct 914553 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 914583 >seq2283 Length=901578 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||||||| | | |||| ||| | || |||||||| ||||| ||||| ||| Sbjct 857288 CCACCCCTCAAGCGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAA 857229 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| |||||||| || || ||||| || || | |||||||| | || Sbjct 857228 AGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 857169 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | || || || || ||||| || || || || || | |||| || ||| | Sbjct 857168 ATGCCTTCTTTATCCTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCA 857111 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | || | ||| ||||| || || || || |||||||||||||| ||||| || Sbjct 857110 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTT 857059 >seq2477 Length=1236505 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 5/193 (3%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||| | || ||||| | | |||| ||||||||||| || |||||| Sbjct 1060103 TCTTTCTGAATGCTGGGATCGGAAAGAGTGTGGCCATCCTCCAGCTGTTTGCCCGCAAAT 1060044 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||||||||| || || |||||| || Sbjct 1060043 ATCAGGTGCTGCTGGTCAAGTGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGAC--AT 1059986 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || | | |||| || ||| || || | ||| ||||| || ||| | || ||||||| Sbjct 1059985 TCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCATCAGGGTCTTCA 1059926 Query 34969 CAAAGATCTGCAT 34981 |||| |||||||| Sbjct 1059925 CAAA-ATCTGCAT 1059914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324481802038776