Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq4625 114 2e-20 seq1562 100 5e-16 seq4569 89.7 9e-13 >seq4625 Length=314844 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||| | ||||| || || | ||| | ||| | ||| || ||| || Sbjct 137034 TTTCTTAGCACCATCATGAAGTCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTT 137093 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 ||| || |||| ||| | || |||| ||| || ||||||||||| | ||| || || Sbjct 137094 ATAGTC----AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTG 137149 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || | |||||||| |||| |||||||| Sbjct 137150 GTCAGAAGGAATTCCTTCCTTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGA 137209 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATAT 172063 | ||| || | ||||| ||||| || || || | ||||| | ||| || Sbjct 137210 GGGTTCAACCTTGAGAGTGATGGTCTTCCCTGTAAGGGTTTTTACGAAAAT 137260 >seq1562 Length=962321 Score = 100 bits (110), Expect = 5e-16 Identities = 166/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | || | ||| | ||| || ||| || Sbjct 541093 TTTCTTAGCACCACCACGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTTTTGAATGTT 541034 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| | | | | |||| ||| || ||||||||||| ||||| || || Sbjct 541033 CTAGTCAGACAAAGTACTTCCATATTCCAGTTGCTTGCCAGCAAAAATCAATCTTTGCTG 540974 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || ||| || ||||| || || || |||||||| | | |||||||| Sbjct 540973 ATCAGGAGGAATTTTTTGCTTATCCTGGATCTTGACCTTTACATTTTCTGTTGTATCTGA 540914 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || | ||| | |||| || || || | ||||| ||||| |||||||| || Sbjct 540913 GGGTTCAACCTTGAGAATGGTGGTCTTCCCTGTAAGGGTTTTTATGAAAATCTGCATCTT 540854 >seq4569 Length=367135 Score = 89.7 bits (98), Expect = 9e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 171858 AATACTAAATGTAAAGT-AGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTC 171916 || || | ||| ||||| ||| |||| ||| | || | ||||| |||| | | | || Sbjct 167180 AACACAAGATGAAAAGTGAGCTCCTTTTGAA-TGTTGTGGTCTGACAAAGGACATCCATC 167238 Query 171917 ATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATC 171976 |||| ||| || ||||||||||| | ||| || || | ||| || |||||||| |||| Sbjct 167239 TTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATAAGGAGGAATTCCTTCCTTATG 167298 Query 171977 TTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGT 172036 | || || |||| | || |||||| || || | ||| || || | | | ||||| Sbjct 167299 CGGGATCTTGGCTTTTCCTTTTTATATAGTGTCCGAGGGTTCGACCTCAAAAATGATGGT 167358 Query 172037 TTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || | | ||||| ||||| |||||||| || Sbjct 167359 CTTCCCCATAAGGGTTTTTATGAAAATCTGCATCTT 167394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904701908088600