Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6496 132 4e-26 seq1562 109 5e-19 seq4169 89.7 5e-13 seq4625 87.8 2e-12 >seq6496 Length=1068356 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 914356 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCCAG 914297 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || ||||||||||||||| || || || || || ||||| Sbjct 914296 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGATCA 914237 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| ||||| |||||||| ||| | | | | |||| || || || Sbjct 914236 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAA 914177 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || || || || || || |||||||| |||| ||| | ||||| Sbjct 914176 CATCCAGAAAGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 914129 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || || || ||||| || || || Sbjct 914586 ACAATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCC 914527 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || ||||||||||||||| || || || || || || Sbjct 914526 AGCGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGAC 914467 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||||||||| |||||||| ||| | | | | |||| || || Sbjct 914466 CAGCAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTAC 914407 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || || || || || || ||| ||||| Sbjct 914406 AACATCCAGAAAGAGTCCACCCTGCACCTGGTG 914374 >seq1562 Length=962321 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || || ||||| || || || || || | | ||| | || ||| || | Sbjct 540856 GATGCAGATTTTCATAAAAACCCTTACAGGGAAGACCACCATTCTCAAGGTTGAACCCTC 540915 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| ||||| ||||| |||||||| || || || ||| ||||| ||||| Sbjct 540916 AGATACAACAGAAAATGTAAAGGTCAAGATCCAGGATAAGCAAAAAATTCCTCCTGATCA 540975 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||| ||||| || || || ||||| || || | |||| || || || Sbjct 540976 GCAAAGATTGATTTTTGCTGGCAAGCAACTGGAATATGGAAGTACTTTGTCTGACTAGAA 541035 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| || || || ||| | |||||| || | || || || Sbjct 541036 CATTCAAAAGGAGTCCACTCTTCACCTTGTGTTGAGACTTCGTGGTGG 541083 >seq4169 Length=151675 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/210 (71%), Gaps = 9/210 (4%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||| | || || || || ||||| | ||||| || ||| || | Sbjct 18324 GATGCAGATTTTCGTAAAAGCCCTTACAGGGAAGACTATCGCTCTCGAGGTCGAACCCTC 18265 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| ||||| ||||| |||||||| || || |||||||| ||| ||||| Sbjct 18264 GGATACAACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCT---GATCA 18208 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATG-TCAGATTATA 24881 ||| | |||| ||||| || || || ||||| ||| || || | | || || | Sbjct 18207 GCAA-GACTGATTTTTGCTGGCAAGCAACTGGAAGATG---GACACGTACTTTGACTACA 18152 Query 24882 ACATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||||||||||| || || || || |||| Sbjct 18151 ACATTCAAAAGGAGTCCACTCTTCATCTTG 18122 >seq4625 Length=314844 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| || || || || || || || ||| | || ||| || | || ||| || ||| Sbjct 137251 AAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTCAGATACAATAAAAAAT 137192 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 ||||| |||||||| || || |||||||| ||| | || || ||| | |||| ||| Sbjct 137191 GTAAAGACCAAGATCCAGGATAAGGAAGGAATTCCTTCTGACCAGCAAAGACTGATTTTT 137132 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || || ||||| ||| || || | || ||||||||||||||||| | Sbjct 137131 GCTGGCAAGCAACTGGAAGATG-GACGTACTTT---GACTATAACATTCAAAAGGAGACC 137076 Query 24899 ACACTACACTTGGTGTTGCGA 24919 || || || | |||||| || Sbjct 137075 ACTCTTCATCTTGTGTTGAGA 137055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449681834734760