Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6496 125 6e-24 seq4625 93.3 3e-14 seq4169 84.2 2e-11 >seq6496 Length=1068356 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| ||||| ||||| || || ||||| ||||| || ||||| || || | Sbjct 914129 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 914188 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | |||| || |||||||| || || Sbjct 914189 AAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGG 914248 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | ||| |||||| | || | ||||| | || || Sbjct 914249 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACC 914308 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | ||| || || || |||||||| Sbjct 914309 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 914355 >seq4625 Length=314844 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| |||| || |||||||||||||| || | || || ||| Sbjct 137058 CAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTC----AAAGTACGTCCATC 137113 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| ||||||||| || | ||||| || || || || Sbjct 137114 TTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTTCCTTATC 137173 Query 29694 TTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 || || || || || ||| ||| || || || || |||| || | ||||| || | Sbjct 137174 CTG-GATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAGTGATGG 137232 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATAT 29780 | || || || | |||||| || || || Sbjct 137233 TCTTCCCTGTAAGGGTTTTTACGAAAAT 137260 >seq4169 Length=151675 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/209 (70%), Gaps = 10/209 (5%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAG--AATCATCGAGT 29640 |||||| ||||| || ||||||||||| || || | || || | ||| || ||| Sbjct 18126 ATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTGTCCATCTTCCAGT 18181 Query 29641 TGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAAT 29700 || ||||||||| | |||| || ||||||||| ||||| || || || || || | Sbjct 18182 TGCTTGCCAGCAAAAATCAGTC-TTGCTGATC---AGGAATTCCTTCCTTATCCTGGATC 18237 Query 29701 TTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCA 29760 || || ||| ||||| || || || |||| || || |||| ||||| || || Sbjct 18238 TTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGCGATAGTCTTCCCT 18297 Query 29761 GTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | || ||| || || |||||||| || Sbjct 18298 GTAAGGGCTTTTACGAAAATCTGCATCTT 18326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385039072344747