Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_024382.1 Length=137090 Score E Sequences producing significant alignments: (Bits) Value seq2526 87.8 2e-12 >seq2526 Length=967649 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/133 (76%), Gaps = 5/133 (4%) Strand=Plus/Minus Query 1071 CCACAGCTCTAGCTTCTGGTCTGAAAAAGAGTAGGTTTCTCTTGAGAGTTAAGGAAGGCA 1130 ||||||| |||||||| |||||| ||| |||||| | ||| || | | | ||||||| Sbjct 881670 CCACAGCCCTAGCTTCAGGTCTGGAAA-GAGTAGCTG-CTCCTGGGGGCAACAGAAGGCA 881613 Query 1131 TTTTAAAGAAAAGGCTTAGaaaaaaaaTCTGGTGGGCACTTACATATTCTTCCATAAGT- 1189 |||| |||||| | | ||||| |||||| |||||||||| || ||||||| |||| Sbjct 881612 TTTTTAAGAAATAGTGTGGAAAAGAAATCTCTAGGGCACTTACGTAGTCTTCCAAAAGTG 881553 Query 1190 --TTTGAAAATGA 1200 ||||| || || Sbjct 881552 TCTTTGACAAGGA 881540 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/111 (78%), Gaps = 6/111 (5%) Strand=Plus/Minus Query 171 CACAAGATACAAAACAGGTTATCAGAAAA-ATTCAGTATAATTTATTAAATAATTTTCAA 229 ||||| || |||||||| |||| |||||| | ||| ||||||||||||||||| || ||| Sbjct 882865 CACAAAATGCAAAACAGATTATGAGAAAACAATCAATATAATTTATTAAATAAATTACAA 882806 Query 230 GGGCTTCTTTAAGAAGCATTAACAA-TCTAACAACATTTTATAAATAACAA 279 |||| || ||| ||| ||||||| ||| | || | ||||||| ||| Sbjct 882805 AGGCTCCTCCAAGTAGCCTTAACAACTCTTA----ATATAATAAATATCAA 882759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438349672106000