Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq6496 154 3e-32 seq1562 111 3e-19 seq4169 109 1e-18 seq4625 107 4e-18 seq3087 104 5e-17 seq4569 100 6e-16 seq573 93.3 8e-14 >seq6496 Length=1068356 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| ||||| ||||| || |||||||| || || |||||||| || || || || || Sbjct 914128 ACCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 914187 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | | || ||||| || || || ||||||||||| || || || ||||| || || Sbjct 914188 CAAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 914247 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| ||||| |||||||| || ||||| || || || || | || || || Sbjct 914248 GATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGAC 914307 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| |||| ||||| || || |||||||| Sbjct 914308 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 914355 >seq1562 Length=962321 Score = 111 bits (122), Expect = 3e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| ||||| || || || || || || || ||||| | | | || || | ||| ||||| Sbjct 541060 GTGAAGAGTGGACTCCTTTTGAATGTTCTAGTCAGACAAAGTACTTCCATATTCCAGTTG 541001 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || |||||||| || | |||||| ||||| ||||| ||| || |||||| || ||||| Sbjct 541000 CTTGCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTTTTTGCTTATCCTGGATCTT 540941 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 | ||||||||||| | ||||| ||||| || | | | | | ||||| ||||| Sbjct 540940 GACCTTTACATTTTCTGTTGTATCTGAGGGTTCAACCTTGAGAATGGTGGTCTTCCCTGT 540881 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | || |||| || |||||||| Sbjct 540880 AAGGGTTTTTATGAAAATCTGCAT 540857 >seq4169 Length=151675 Score = 109 bits (120), Expect = 1e-18 Identities = 120/158 (76%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| ||||| || |||||||| || |||||| | ||||| ||| ||||||||| Sbjct 18170 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTT-GCTGATCAGGA---ATTCCTTCC 18225 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 ||||| || ||||| || ||||||||||| | ||||| ||||| || || | || Sbjct 18226 TTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGCG 18285 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| ||||| | | ||||| || |||||||| Sbjct 18286 ATAGTCTTCCCTGTAAGGGCTTTTACGAAAATCTGCAT 18323 >seq4625 Length=314844 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| ||||| || |||||||| || |||||||| || || | ||| ||||||||| Sbjct 137109 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTTCC 137168 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 ||||| || ||||| | |||||||||| || ||||| ||||| || | | ||| Sbjct 137169 TTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAGTG 137228 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATAT 82804 || ||||| ||||| | || ||||| || || Sbjct 137229 ATGGTCTTCCCTGTAAGGGTTTTTACGAAAAT 137260 >seq3087 Length=630865 Score = 104 bits (114), Expect = 5e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214 |||||||||| | |||||||||| | || || || || || ||||||||||| || ||| Sbjct 260048 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACTGTGTTTTTCATCCTGAGG 260107 Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274 || || || || ||| ||| | || ||||||||||| | ||| |||||||| || Sbjct 260108 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACGTTG 260167 Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 | ||| | || ||||| ||| |||| || || |||| Sbjct 260168 TGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACAAG 260204 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 60309 AAGCATTTTTCGGAGCTCAGTTGAATTCCTTAATCCATGTTATTATGTATACTTATTATG 60368 |||||||||||||||| ||| |||||||||| |||||||| |||||||| | || |||| Sbjct 262087 AAGCATTTTTCGGAGCCCAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATG 262146 Query 60369 GTATGGCGGCGTGTGGACCTATGTTTAAAAAGTATTTATGGTGGAAGCGTTATCTTACTA 60428 | | | || | ||| || | || |||||||| | |||||||| || || || || | Sbjct 262147 GGTTAACTGCATTTGGCCCATGGATTCAAAAGTATCTTTGGTGGAAACGATACCTGACCA 262206 Query 60429 TAATGCA 60435 | |||| Sbjct 262207 TGTTGCA 262213 >seq4569 Length=367135 Score = 100 bits (110), Expect = 6e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| ||||| || |||||||| || |||||||| |||| ||||| ||||||||| Sbjct 167234 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATAAGGAGGAATTCCTTCC 167293 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 |||| | ||||| |||||| | |||| || || || ||||| || || ||| | Sbjct 167294 TTATGCGGGATCTTGGCTTTTCCTTTTTATATAGTGTCCGAGGGTTCGACCTCAAAAATG 167353 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || | | || |||| || |||||||| Sbjct 167354 ATGGTCTTCCCCATAAGGGTTTTTATGAAAATCTGCAT 167391 >seq573 Length=363558 Score = 93.3 bits (102), Expect = 8e-14 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGA--TTAGTCTTTGTTGATCTGGAGGTATTCCTT 82710 || |||| ||||| || |||||||| | |||||||||| ||||| ||||| ||||||| Sbjct 311993 CCATCTTGCAGTTGCTTGCCAGCAAAAAAATTAGTCTTTGCTGATCAGGAGGAATTCCTT 312052 Query 82711 CCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAG 82770 | ||||| || ||||| || ||||||||||| || |||| | ||| || | | || Sbjct 312053 CATTATCCTGGATCTTAGCCTTTACATTTTCTATTATATCCAAGGATTCAACCTTGAGAG 312112 Query 82771 TTATCGTCTTGCC 82783 | || ||||| || Sbjct 312113 TGATGGTCTTCCC 312125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981344556146413