Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6496 150 2e-31 seq2283 131 2e-25 seq2648 84.2 2e-11 >seq6496 Length=1068356 Score = 150 bits (166), Expect = 2e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||||||||| || ||||| ||| || ||| | || || |||||||| || Sbjct 914386 GGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTGCTTCCC 914445 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || |||||||| |||||||| ||||||| ||| Sbjct 914446 GGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTTGCCTT 914505 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | |||||| ||||||| || |||| ||||| ||| ||||| ||||| || Sbjct 914506 GACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGT 914565 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 914566 CTTCACGAAGATCTGCAT 914583 Score = 147 bits (162), Expect = 2e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| || ||||| ||| || ||| | || || ||| Sbjct 914150 AAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGC 914209 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || |||| |||||| || || |||||||| |||||||| |||| Sbjct 914210 TGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTCTTGGATC 914269 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||||| | ||| | |||||| ||||||| || || | ||||| ||| |||||| Sbjct 914270 TTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCG 914329 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 914330 GTCAGGGTCTTCACGAAGATCTGCAT 914355 >seq2283 Length=901578 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || ||||| ||| | ||| ||| | || || |||||||||| Sbjct 857259 GGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCA-TCTTCCAGCTGCTTGC 857201 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| || ||||||||||| || || |||||| || Sbjct 857200 CTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCT 857141 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 857140 TCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 857081 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 857080 TCTTCACAAAGATTTGCAT 857062 >seq2648 Length=382147 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 133540 GCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGT 133599 |||| || |||||||||||||||||||| ||||| | ||||| | ||||| |||| Sbjct 307697 GCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTCTGCCTTGACATTCTCAATGGTGT 307638 Query 133600 CGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCA 133659 | || |||| || || | ||||| || ||||| ||||| || || | || ||||||| Sbjct 307637 CACTGAGCTCGACCTCAAGGGTGATGGCCTTGCCAGTCAGGGTCTTCAAAAAGATCTGCA 307578 Query 133660 T 133660 | Sbjct 307577 T 307577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483188957427080