Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4625 104 6e-17 seq1562 96.9 8e-15 seq6496 93.3 1e-13 seq2283 93.3 1e-13 seq4169 91.5 3e-13 seq142 86.0 1e-11 >seq4625 Length=314844 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||| || || |||||| | | || ||| || || ||| | || Sbjct 137251 AAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTCAGATACAATAAAAAAT 137192 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||||||| | ||| |||||||| || || Sbjct 137191 GTAAAGACCAAGATCCAGGATAAGGAAGGAATTCCTTCTGACCAGCAAAGACTGATTTTT 137132 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | ||||| || || ||| | || || ||| | Sbjct 137131 GCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTATAACATTCAAAAGGAGACC 137076 Query 206365 ACTCTTCACCTTGTTTTGAGACTTC 206389 |||||||| ||||| |||||||||| Sbjct 137075 ACTCTTCATCTTGTGTTGAGACTTC 137051 >seq1562 Length=962321 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||| || || | || | | | || ||| || || ||| ||| Sbjct 540872 AAAACCCTTACAGGGAAGACCACCATTCTCAAGGTTGAACCCTCAGATACAACAGAAAAT 540931 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || || |||| || || |||||| | || || Sbjct 540932 GTAAAGGTCAAGATCCAGGATAAGCAAAAAATTCCTCCTGATCAGCAAAGATTGATTTTT 540991 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||| ||||||| |||||| | || || ||| | || || ||||| Sbjct 540992 GCTGGCAAGCAACTGGAATATGGAAGTACTTTGTCTGACTAGAACATTCAAAAGGAGTCC 541051 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||||||||| ||||||||||| Sbjct 541052 ACTCTTCACCTTGTGTTGAGACTTCG 541077 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| |||||||||||||| ||||| || || | || ||||||| |||||| Sbjct 541077 CGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTTTTGAATGTTCTAGTCAGACAAAGTA 541018 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||| |||||| ||||| || || || || | | ||| ||| Sbjct 541017 CTTCCATATTCCAGTTGCTTGCCAGCAAAAATCAATCTTTGCTGA 540973 >seq6496 Length=1068356 Score = 93.3 bits (102), Expect = 1e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| ||||| || || || || || ||| || || || ||||| Sbjct 914508 GTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTGATCTTT 914449 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||||||||| | || ||| |||| |||||| ||||||||||||| Sbjct 914448 GCCGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAACATCCAGAAAGAGTCC 914389 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 914388 ACCCTGCACCTGGT 914375 >seq2283 Length=901578 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| |||| Sbjct 857077 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 857136 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || |||||||| || || ||| || || || ||||| Sbjct 857137 GTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 857196 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | |||| |||||| ||||||||||||| Sbjct 857197 GCAGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCCGACTACAACATCCAGAAAGAGTCG 857256 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 857257 ACCCTGCACCTGGT 857270 >seq4169 Length=151675 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/222 (71%), Gaps = 16/222 (7%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAA-CGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231 ||||| ||| | |||| | || ||||| || || ||| || | || || ||| || || Sbjct 18320 CAGAT-TTTCGTAAAAGCCCTTACAGGGAAGACTATCGCTCTCGAGGTCGAACCCTCGGA 18262 Query 206232 CACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| ||| |||||| ||||| || || || ||||||||| || || ||| Sbjct 18261 TACAACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATT---CCTGA---TCA 18208 Query 206292 --AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGG--AAGGACTTTGGCCGATTACA 206347 |||||| || || || || ||||| |||||||||| | | ||||| || |||| Sbjct 18207 GCAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACACGTACTTT----GACTACA 18152 Query 206348 ACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389 || | || || ||||| |||||||| |||| |||||||||| Sbjct 18151 ACATTCAAAAGGAGTCCACTCTTCATCTTGCGTTGAGACTTC 18110 >seq142 Length=647495 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 206270 AAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAA 206329 ||| |||||| || || |||||||| ||||| || || ||||| ||||||||||| Sbjct 530037 AAGAAATTTTTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGAT 530096 Query 206330 GGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389 | ||||| || | |||||| || |||||||| |||||||| || | |||||| ||| Sbjct 530097 GTACTTT----GACTGCAACGTTCAAAAAGAGTCCACTCTTCATTTTATGTTGAGATTTC 530152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181239843855007