Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6496 127 2e-24 seq2283 102 7e-17 >seq6496 Length=1068356 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| |||| |||||| ||| | || ||||||||||| || ||||| Sbjct 914392 CTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTGCTTCCCGGCAAA 914451 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || ||||||||| ||||||| ||| | | | Sbjct 914452 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATT 914511 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || |||| || ||||| Sbjct 914512 CTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 914571 Query 35725 AAATATCTGCATT 35737 || ||||||||| Sbjct 914572 GAAGATCTGCATT 914584 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| |||| |||||| ||| | || ||||||||||| || ||||| Sbjct 914164 CTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAA 914223 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | || | || ||||||||| ||||||| ||| | | | Sbjct 914224 GATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATT 914283 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||||| ||||| || || || |||| || ||||| Sbjct 914284 CTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 914343 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 914344 GAAGATCTGCAT 914355 >seq2283 Length=901578 Score = 102 bits (112), Expect = 7e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| |||| | || || | || ||||||||||| || ||||| Sbjct 857253 CTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAA 857194 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || || || ||| |||||| ||||| | | Sbjct 857193 GATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATT 857134 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 857133 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 857074 Query 35725 AAATATCTGCATTCTG 35740 ||| || |||||| || Sbjct 857073 AAAGATTTGCATTTTG 857058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450577405024360