Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq7036 123 3e-23 >seq7036 Length=213198 Score = 123 bits (136), Expect = 3e-23 Identities = 585/913 (64%), Gaps = 25/913 (3%) Strand=Plus/Plus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742 ||||| | |||||||| || || || || || ||| | || ||||| || || ||| | Sbjct 122501 GAAGAAGCAGAGTTTCCAATAGCATATTCTATAGTGGTTCATCACAAAATTGAAATGCTG 122560 Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802 || | || |||||||||||||| || ||||| |||| ||| | ||||||||| Sbjct 122561 GACAGGCTGCTGAGGGCCATCTATATGCCTCAGAATTTCTATTGCATTCACGTGGACAGA 122620 Query 13803 AAGTCCGGCGACGAGTTCATCCGGG--GC-GTCTCGGCCATCGCCAGGTGCTTCCCTAAC 13859 || || | | |||| | || | || || ||| ||| || || ||| ||| Sbjct 122621 AAATCAG---AAGAGTCCTTCTTAGCTGCAGTGACGGGCATTGCGTCCTGTTTCAGGAAC 122677 Query 13860 GTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCC 13919 || ||||| | | || | ||||| || | || |||||||| || |||||| Sbjct 122678 GTCTTTGTGGCCAGTCAGTTGGAGAGTGTGGTTTATGCATCGTGGAGTCGGGTTCAGGCC 122737 Query 13920 GACCTCAGCTGCATGTCGGACCTGGAC-GCCTCCCCCGT-CAAG-TGGAGGTACCTGCTC 13976 ||||||| ||||||| |||||| || | | || || | |||| |||| | | Sbjct 122738 GACCTCAACTGCATGGGGGACCTCTACAGAATGA---GTGCACGCTGGAAGTACTTAATA 122794 Query 13977 AACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036 || || ||||| ||||| || || | || |||||||| || || || || ||| ||| Sbjct 122795 AATCTTTGCGGTATGGATTTTCCTATTAAAACCAACCTAGAAATTGTCAGGAAGCTCAAG 122854 Query 14037 GCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGCTGCACCGC 14096 || | || | ||| ||| || | |||| |||||| ||| || | | Sbjct 122855 TCCTTCATGGGTGAAAACAGCCTTGAAACCGAGAAGATGCCCTTCCATAAAGAAGAAAGG 122914 Query 14097 ATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGCAGGAACAAG 14156 | ||| ||| ||||| | | || | |||||||||| || | ||| Sbjct 122915 TGGAAAAAGCAGCATGTGGTTGTTAATGGAAA---GCTGGTCAACACGGGGACTGTCAAA 122971 Query 14157 GCCCCGCCGCCGCTCAGGATCCCCATCTTTG--CGGGAAACGCTTACTTTGCGGTCACCC 14214 | | || || || ||| | | ||||| | || | || || |||| ||||| | Sbjct 122972 GTGCGTCCTCCACT--GGAAACACCTCTTTTTTCAGGCAGTGCCTATTTTGTGGTCAGCA 123029 Query 14215 GGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCG 14274 |||||| |||| | || || |||| || | | | ||| | ||| Sbjct 123030 GGGAGTATGTGGGGTATGTGCTAGAGGATGAAAAAATCCAAAAGTTTATGGAGTGGGCGC 123089 Query 14275 AGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGC 14334 ||||||| |||||||| || ||| | || |||||||| | || || || | | | | Sbjct 123090 AGGACACATACAGCCCAGATGAGTATCTCTGGGCCACTATCCAAAGGATCC-CTGAAGTC 123148 Query 14335 CCGGGGGGATCCCCGTTCA-CGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGG 14393 ||||| | | | || | | ||||||||| || |||||| | | | |||| Sbjct 123149 CCGGGCTCACTCTCCTTGAGCCATAAGTACGACTTGTCTGACATGCAGTCGGTTGCCAGG 123208 Query 14394 TTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGC 14453 || ||||||||||| ||||| ||||| ||| | || || || | ||||| || ||| Sbjct 123209 TTTGTCAAGTGGCAGTACTATGAGGGTGATGTTTCTAAGGGTGCTCCCTACCCACCCTGC 123268 Query 14454 GACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAAG 14513 | ||||||||||| | | | | ||||| || || |||| ||| |||| ||| || | Sbjct 123269 AATGGCATCCACGTGCGCTCGGTGTGCATTTTTGGAGCCGGAGACTTGAACTGGATGCTG 123328 Query 14514 AGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACG--GACGAGTTCGCCGTGC 14571 | | ||| |||| ||||| ||||| ||| | | |||| ||| | || ||| | | Sbjct 123329 CGTACACACCACTTGTTTGCCAATAAGTTTGAC-ATG-GACGTCGACCACTTTGCCATCC 123386 Query 14572 GCTGTCTGGACGA 14584 |||||||| || Sbjct 123387 AGTGTCTGGATGA 123399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658423276913920