Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq8239 183 3e-41 >seq8239 Length=161809 Score = 183 bits (202), Expect = 3e-41 Identities = 137/161 (85%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || |||||||||||||||||||| ||||| || || |||||||||||||| || | ||| Sbjct 148513 TGTGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGCCC 148572 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||||||||| || || || ||||||||||||||||| || ||| | |||||||| ||| Sbjct 148573 ATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 148632 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||| | ||| ||||| || |||||||||||||| ||||| Sbjct 148633 CAGAGCGCGTGACACGGAGGCAGCGCCATCAGAGGAAGATC 148673 Score = 183 bits (202), Expect = 3e-41 Identities = 137/161 (85%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| |||||||||||||| || ||||| ||| | |||||||| |||||||| | ||| Sbjct 148673 GATCTTCCTCTGATGGCGCTGCCTCCGTGTCACGCGCTCTGCCAGTTCTACGTGGTGAAC 148614 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || || |||||||||||||| | || ||||||||| Sbjct 148613 GGTGAGCTGTCCTGCCAGCTGTACCAGCGGTCGGGAGACATGGGCCTGGGCGTGCCGTTC 148554 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||||||||||||||| || Sbjct 148553 AACATCGCCAGCTACGCCCTGCTCACGTACATGATCGCACA 148513 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || |||||||| || ||||| ||||| || || || || |||||||| || ||| | Sbjct 151797 TATTCTGCCCCAAAATGCCTCCATTGGAAGCCATAAACTGGACCCAAGTCCCCTTCCCCT 151856 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | | ||| ||| | ||||||||| |||| || || | ||||||||||| ||| Sbjct 151857 CTGGTGGAGAATCCCAGGCCATCCAGAAAGCCTCGGGATCCATTGGCGTCCCAGATTTTC 151916 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 || ||| ||| || || || || | ||| |||| Sbjct 151917 ACTCCCTTGGAAGACAGTTCTTTAGCGTTTGTGG 151950 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 |||| ||| | || || || || ||| ||| ||||| ||||||||||| | || || | Sbjct 151950 CCACAAACGCTAAAGAACTGTCTTCCAAGGGAGTGAAAATCTGGGACGCCAATGGATCCC 151891 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412 ||| ||||||||| | ||| ||| | | | | ||| || |||||||| || || | Sbjct 151890 GAGGCTTTCTGGATGGCCTGGGATTCTCCACCAGAGGGGAAGGGGACTTGGGTCCAGTTT 151831 Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 | || ||||| ||||| || |||||||| || || Sbjct 151830 ATGGCTTCCAATGGAGGCATTTTGGGGCAGAATA 151797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448047418956240