Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2283 172 1e-37 seq4625 163 7e-35 seq6496 156 1e-32 seq1562 154 3e-32 seq4169 136 9e-27 seq573 134 3e-26 seq4569 125 2e-23 seq142 109 1e-18 seq1065 98.7 2e-15 seq2648 95.1 3e-14 >seq2283 Length=901578 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||||||| |||||||| || || | ||| || | |||||| Sbjct 857273 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCT 857214 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | || |||||||| || | ||||| || ||| Sbjct 857213 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 857154 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || |||||||||||| | || ||||| || ||||| ||| Sbjct 857153 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 857094 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || ||||| ||||| | |||||||| Sbjct 857093 TTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTT 857059 >seq4625 Length=314844 Score = 163 bits (180), Expect = 7e-35 Identities = 164/211 (78%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| | ||||| |||||||||| ||| ||||| |||||||| || ||| | | Sbjct 137051 GAAGTCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTCA--AAG--TAC 137106 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 |||||||||||| |||||||| || || || || | ||| ||||||| ||||| ||||| Sbjct 137107 GTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTT 137166 Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAG 211074 |||| ||||||||||| || || |||| || || || ||| |||||||| ||||| Sbjct 137167 CCTTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAG 137226 Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||| ||||| || || || || ||||| || Sbjct 137227 TGATGGTCTTCCCTGTAAGGGTTTTTACGAA 137257 >seq6496 Length=1068356 Score = 156 bits (172), Expect = 1e-32 Identities = 169/223 (76%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||||||||||| |||||||| || || | | ||| | |||||| Sbjct 914372 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCT 914431 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || | || |||||||| || | || |||||||| Sbjct 914432 TCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 914491 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || || || ||||||||||| | || |||||||| ||||| ||| Sbjct 914492 TGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTC 914551 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTAC 211125 || || || || ||||| || || | ||||||| | | ||||| Sbjct 914552 TTGCCAGTCAGGGTCTTCACGAAGATCTGCATTGTCT-GTTAC 914593 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || ||||||||||| |||||||| || || | | ||| | |||||| Sbjct 914144 AGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCT 914203 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || | || || ||||| || | || |||||||| Sbjct 914204 TCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTCT 914263 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || || || ||||||||||| | || ||||| || ||||| ||| Sbjct 914264 TGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTC 914323 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 914324 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 914355 >seq1562 Length=962321 Score = 154 bits (170), Expect = 3e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | |||||||||||||||||||| ||||| ||||| || || | | || Sbjct 541078 ACGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTTTTGAATGTTCTAGTCAGACAAAGT 541019 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 ||||||| |||||| |||||||| || || || | | ||| || |||||||||| | Sbjct 541018 ACTTCCATATTCCAGTTGCTTGCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTTT 540959 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || ||| ||||||||||| || || ||||| | || || ||| |||||||| ||| Sbjct 540958 TTGCTTATCCTGGATCTTGACCTTTACATTTTCTGTTGTATCTGAGGGTTCAACCTTGAG 540899 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 | || | ||||| || || || || |||| || | |||||| || Sbjct 540898 AATGGTGGTCTTCCCTGTAAGGGTTTTTATGAAAATCTGCATCTT 540854 >seq4169 Length=151675 Score = 136 bits (150), Expect = 9e-27 Identities = 167/224 (75%), Gaps = 8/224 (4%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| | |||| |||||||||||||| ||||| ||||| || || || | | Sbjct 18110 GAAGTCTCAACGCAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC---AAAGTACG 18166 Query 210955 T-TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||||||| |||||||| || || || || | ||| || |||||| | |||| Sbjct 18167 TGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTC-TTGCTGATCAGGA---ATTCCT 18222 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||||||||| || || ||||| | || || ||| ||| ||||||||| Sbjct 18223 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGA 18282 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 | ||| ||||| || || || | ||||| || | |||||| || Sbjct 18283 GCGATAGTCTTCCCTGTAAGGGCTTTTACGAAAATCTGCATCTT 18326 >seq573 Length=363558 Score = 134 bits (148), Expect = 3e-26 Identities = 149/196 (76%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| | ||||| ||||||||| |||| ||||| ||||| ||||| ||| | | Sbjct 311935 GAAGTCTCAACACAAGATGAAGAGTGCACTCCTTTTGAATGTTGTAATCA--AAG--TAC 311990 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATA--AGGCGTTGTTGGTCAGGAGGAACTCC 211012 |||||||| ||| |||||||| || || | | || | ||| || |||||||||| ||| Sbjct 311991 ATCCATCTTGCAGTTGCTTGCCAGCAAAAAAATTAGTCTTTGCTGATCAGGAGGAATTCC 312050 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| || ||||||||||| || || ||||| || | || || |||||||| ||| Sbjct 312051 TTCATTATCCTGGATCTTAGCCTTTACATTTTCTATTATATCCAAGGATTCAACCTTGAG 312110 Query 211073 AGTGATCGTCTTTCCC 211088 |||||| ||||| ||| Sbjct 312111 AGTGATGGTCTTCCCC 312126 >seq4569 Length=367135 Score = 125 bits (138), Expect = 2e-23 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCG-CAAGGGTCCTTCCATCTTC 210964 ||||| |||| |||| ||| ||||| ||||| | || | ||| || | | |||||||| Sbjct 167183 ACAAGATGAAAAGTGAGCTCCTTTTGAATGTTGTGGTCTGACAAAGGACAT-CCATCTTC 167241 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 ||| |||||||| || || || || | ||| || | |||||||| ||||||||| | | | Sbjct 167242 CAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATAAGGAGGAATTCCTTCCTTATGCGG 167301 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 |||||| ||| | |||| || ||||| ||| ||| ||||| | | |||| ||||| Sbjct 167302 GATCTTGGCTTTTCCTTTTTATATAGTGTCCGAGGGTTCGACCTCAAAAATGATGGTCTT 167361 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT-TTTATGG 211121 ||| | || || |||| || | |||||| || |||| Sbjct 167362 CCCCATAAGGGTTTTTATGAAAATCTGCATCTTGATGG 167399 >seq142 Length=647495 Score = 109 bits (120), Expect = 1e-18 Identities = 142/194 (73%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||||||||||||||||||| | ||| | || ||| | | |||||||||||| ||| Sbjct 530135 TGAAGAGTGGACTCTTTTTGAACGTTGCAGTCA--AAG--TACATCCATCTTCCAGTTGC 530080 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || ||||| || | ||| || |||||| || | ||| ||| ||| ||| Sbjct 530079 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAAAAATTTCTTTCTTATCCGGGA----A 530024 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 | |||| | || || || | ||| ||||||||| |||||||| ||||||||| | Sbjct 530023 GGCCTCACCTCCTCTATTGTATTGGAGGGTTCAACCTCAAGAGTGATGGTCTTTCCCATA 529964 Query 211092 AGAGTCTTTACAAA 211105 ||||| || |||| Sbjct 529963 AGAGTTTTGGCAAA 529950 >seq1065 Length=383968 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 ||||| | ||||||| |||| ||||| | || || || | || | ||||||||| Sbjct 247971 ACAAGATAAAGAGTGAACTCCTTTTGAACTTTGTAGTCAGACAGAGAATGTCCATCTTCT 248030 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 || | |||| || ||| | || ||| || |||||||||| | ||||||| |||||| Sbjct 248031 AGGTTTCTGCCAGCAAAGGTCAGTTTTTGCTGATCAGGAGGAATTTCTTCCTTATCCTGG 248090 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| |||| || || || || || || |||||| | |||||||| || || Sbjct 248091 ATCTTGGCCTTCATATTGTCTATTGTATCCAAGGGTTCAACTTTAAGAGTGATGGTTTTC 248150 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || |||| |||| || | |||||| || Sbjct 248151 CCTGTAAGAGCTTTTATGAAAATCTGCATCTT 248182 >seq2648 Length=382147 Score = 95.1 bits (104), Expect = 3e-14 Identities = 118/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||||||||||| ||| || ||||| || | | || |||||||| | |||||| Sbjct 307734 CCATCTTCCAGCTACTTCTTGGCAAAGATCAGTCTCCGCTGATCAGGAGGGATGCCTTCC 307675 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCA--GAGCTTTCAACCTCGAGAG 211074 ||||| ||||||| | || || || || ||||||||| |||| || ||||| || | Sbjct 307674 TTGTCTTGGATCTCTGCCTTGACATTCTCAATGGTGTCACTGAGC--TCGACCTCAAGGG 307617 Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| | ||| || || || ||||| | ||| | |||||| Sbjct 307616 TGATGGCCTTGCCAGTCAGGGTCTTCAAAAAGATCTGCAT 307577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158582187319955