Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06]
38,367 sequences; 2,115,568,035 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq194 104 2e-17
seq1400 96.9 3e-15
seq5886 82.4 7e-11
>seq194
Length=1934172
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| || ||||| || | |||||||| | |||| || ||
Sbjct 227009 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 226950
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| ||||| | ||||| || ||||||||||| |||||||| || || ||||| |||
Sbjct 226949 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 226890
Query 4692 AC 4693
||
Sbjct 226889 AC 226888
Score = 95.1 bits (104), Expect = 1e-14
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871
|||| ||| ||||| || || || || |||||||||||||||||||| ||||| || |||
Sbjct 225192 TCTTTAATGTAAGTATCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 225133
Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926
|| || || || || || || | ||||||||| | |||||||| | | |||||
Sbjct 225132 ATTTGGAAGCCATAGAAACAGCGAGCTTCTGTAATCTGAACTTCTTGGCTAAATC 225078
>seq1400
Length=560904
Score = 96.9 bits (106), Expect = 3e-15
Identities = 182/264 (69%), Gaps = 13/264 (5%)
Strand=Plus/Minus
Query 4737 AATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---AT 4793
|| ||||||| || || ||||| || || || || || | || || || || | ||
Sbjct 277771 AAGGCCCAGTCTGCCTTCTTCTTCACACAAGGCATCGTTTCAATGGCATTGAAGAGAAAT 277712
Query 4794 TTACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGA 4852
| |||| || ||| |||| ||| ||||| || || | |||||||| |||||
Sbjct 277711 TCCCTTTCTT----TGGAATCTTTAAT----GTGTCCATGAGGAA-CTATACATCTCAGA 277661
Query 4853 ATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAAC 4912
|||||| |||| || ||||| || || || || || || |||||||| | |||||
Sbjct 277660 ATGTATGTTTTACATGGCAATTTGGAAGCCATAGAAACAGTGGGCTTCTGTAATCTGAAC 277601
Query 4913 TTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAA 4972
|| | | ||| | || ||| |||| || |||||| | |||| || |||||||| ||
Sbjct 277600 GTCTTGGCTAAAACGCTCCACTCAGTTGTCATTTACTCTGCCGTTGCTTGCTGCAAAGAA 277541
Query 4973 CGCCAAAACATGAGATATAAAGTA 4996
|||| |||| || |||| |||
Sbjct 277540 AGCCAGAACACACGACATAAGGTA 277517
>seq5886
Length=918977
Score = 82.4 bits (90), Expect = 7e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990
||| || ||||| ||||| || || ||||||||||| ||||| || || | ||||| ||
Sbjct 178380 TACCAAATTTTCATTTACAATTCCATCACTGGCTGCGAAAAAGGCTAAGATGTGAGAGAT 178439
Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050
||| |||| || || | ||||| || |||||||| || | ||| || | ||| || ||
Sbjct 178440 AAAATACTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATAAGTCGAC 178499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426849912541211
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |