Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq8239 140 2e-28 >seq8239 Length=161809 Score = 140 bits (154), Expect = 2e-28 Identities = 130/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266 ||| ||||||| ||| || |||||||||||||| || | ||||||||||||||| || || Sbjct 148500 TAGACCGGTGATGTGTGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAACGG 148559 Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326 || || || |||||||| ||||||| |||||| ||||| || || ||||| || | Sbjct 148560 CACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCAC 148619 Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| ||||| || | ||||| |||||||| || ||||| || Sbjct 148620 CACGTAGAACTGGCAGAGCGCGTGACACGGAGGCAGCGCCATCAG 148664 Score = 98.7 bits (108), Expect = 7e-16 Identities = 125/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| ||||| || ||||||||||||||||| || || || || |||| ||| Sbjct 151787 CATATCTTTGTATTCTGCCCCAAAATGCCTCCATTGGAAGCCATAAACTGGACCCAAGTC 151846 Query 27549 TCCCTCTTCCCTGTGCTCGA--AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCG 27606 || || |||| || | || | ||| |||| |||| ||| ||| || |||||| Sbjct 151847 CCCTTC--CCCTCTGGTGGAGAATCCCAGGCCATCCAGAAAGCCTCGGGATCCATTGGCG 151904 Query 27607 TCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||||| || || ||||| || || ||||| | ||||||||| || Sbjct 151905 TCCCAGATTTTCACTCCCTTGGAAGACAGTTCTTTAGCGTTTGTGGATCC 151954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369334419241577