Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6496 168 1e-36 seq2283 122 2e-22 seq4169 113 9e-20 seq2477 113 9e-20 seq4569 100 6e-16 seq3411 98.7 2e-15 seq2959 98.7 2e-15 seq83 95.1 3e-14 seq8693 89.7 1e-12 seq3912 89.7 1e-12 seq3029 89.7 1e-12 seq1797 89.7 1e-12 >seq6496 Length=1068356 Score = 168 bits (186), Expect = 1e-36 Identities = 178/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 ||||| | || || || ||||| || | ||| ||||| |||||||||||||| | | Sbjct 914357 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 914416 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || || || |||||||||||||||| | || |||||| || Sbjct 914417 AAG-GTGCGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 914475 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||||||||| || || | ||||| ||||| | ||||| Sbjct 914476 GATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGAC 914535 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 ||||| ||||| ||||| || |||| ||||| ||||| ||||||||| || Sbjct 914536 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTGTC 914587 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||| || | || ||| || |||| || | ||| ||||| |||||||||||||| | Sbjct 914128 ACCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 914187 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||| ||||| || || || ||||| |||||||||| | || || ||| | Sbjct 914188 CAAG-GTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGG 914246 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || ||||||||||||||||||||||| || || | ||||| ||||| | |||| Sbjct 914247 GGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGA 914306 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 914307 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 914355 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 924343 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 924285 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 931155 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 931097 >seq2283 Length=901578 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || ||| || ||||| || | || ||||| |||||||||||||| | | Sbjct 857288 CCACCCCTCAAGCGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAA 857229 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || || || || || |||||||| | | || |||||| || Sbjct 857228 AGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 857169 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || || || |||||||| || || || | ||||| ||||| | || || Sbjct 857168 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACC 857109 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| || |||| ||||| || || || |||||||| Sbjct 857108 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTT 857059 >seq4169 Length=151675 Score = 113 bits (124), Expect = 9e-20 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| |||||||||||| ||| | | ||||| || ||||| || || ||||| Sbjct 18139 TCCTTTTGAATGTTGTAGTCA--AAGTACGTGTCCATCTTCCAGTTGCTTGCCAGCAAAA 18196 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | ||| || ||| ||||| || ||||| || |||||||| || ||||| | Sbjct 18197 ATCAGTC-TTGCTGATCA---GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 18252 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || | || ||||| | |||||| ||||||| ||| ||||| || || | | || ||| Sbjct 18253 TCTGTTGTATCCGAGGGTTCGACCTCGAGAGCGATAGTCTTCCCTGTAAGGGCTTTTACG 18312 Query 283089 AATATCTGCATTTT 283102 || |||||||| || Sbjct 18313 AAAATCTGCATCTT 18326 >seq2477 Length=1236505 Score = 113 bits (124), Expect = 9e-20 Identities = 162/227 (71%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| |||| ||| | | | | | ||||| || ||| || || | | Sbjct 1060139 CCACCTCGCAGATGAAGCACCTGGTTCAGGGCGGACTCTTTCTGAATGCTGGGATCGGAA 1060080 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||| |||||||||| || ||||| || ||||| |||| | || |||||| || Sbjct 1060079 AGAGTGTGGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGGTGCTGCTGGTCAAGTGGG 1060020 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||||||||| || ||||| || | || | ||||| | ||||| Sbjct 1060019 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACC 1059960 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||| ||| ||||| || || |||||||| Sbjct 1059959 TCAAGGGTGATGGTCTTGCCCATCAGGGTCTTCAC-AAAATCTGCAT 1059914 >seq4569 Length=367135 Score = 100 bits (110), Expect = 6e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 || ||||| || ||| || ||||| ||||||| ||| | | | | ||||| || Sbjct 167183 ACAAGATGAAAAGTGAGCTCCTTTTGAATGTTGTGGTCTGACAAAGGACATCCATCTTCC 167242 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 ||||| || || ||||| |||| | ||| || | | ||||| || ||||| | || Sbjct 167243 AGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATAAGGAGGAATTCCTTCCTTATGCGGG 167302 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| |||||| | | | ||||||||||| | |||||| || | | |||| ||||| Sbjct 167303 ATCTTGGCTTTTCCTTTTTATATAGTGTCCGAGGGTTCGACCTCAAAAATGATGGTCTTC 167362 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTTCAT 283105 ||| | | || || | ||| |||||||| || || Sbjct 167363 CCCATAAGGGTTTTTATGAAAATCTGCATCTTGAT 167397 >seq3411 Length=1164264 Score = 98.7 bits (108), Expect = 2e-15 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 518795 TTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 518853 >seq2959 Length=556104 Score = 98.7 bits (108), Expect = 2e-15 Identities = 117/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 282881 CAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCG 282940 ||||||||| ||||| |||| || ||||| |||||||||| ||| ||||| Sbjct 157003 CAGGCGAAGCACCAGCTGTAGGGTAGACTCTTTCTGGATGTTGTG------AAGAGTGCG 156950 Query 282941 GCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTC 283000 ||||||||| || ||||| || ||||| |||| ||| | | |||| || || ||| Sbjct 156949 GCCATCCTCCAGCTGTTTGCCTGCAAATATCAGACGCTAATAGTCAGGTGGGATGCCCCT 156890 Query 283001 CTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 |||| ||||||| || ||||| ||| | || || ||||| Sbjct 156889 CTTGCCTTGGATGTTGGCTTTGACGTTGTCTATGGTGTC 156851 >seq83 Length=489730 Score = 95.1 bits (104), Expect = 3e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||||||||| ||||| || | ||| ||||| || ||||| ||| | Sbjct 29822 CCACCTCACAGGCGAAGCACCAGCTGCAGGGTGGACTCTTTCTGTTTGTTGGAGTTTGAG 29763 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||||| || |||||| | ||||| |||| | || |||||| ||| Sbjct 29762 AGAATGTGACCATCCTCCAGCTGTTTCTCTGCAAATATCAGATACTGCTGGTCAGGTGGA 29703 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024 || ||||||||||||||||| || | ||| || Sbjct 29702 ATGCCCTCCTTGTCTTGGATTTTAGTTTTGAC 29671 >seq8693 Length=7356 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 1209 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 1151 >seq3912 Length=424313 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 22838 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 22780 >seq3029 Length=246148 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 52957 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 53015 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 130093 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 130035 >seq1797 Length=137283 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 52498 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 52556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046224646888018