Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6496 140 2e-28 seq2283 120 2e-22 seq4625 98.7 7e-16 >seq6496 Length=1068356 Score = 140 bits (154), Expect = 2e-28 Identities = 174/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | ||||||||| || ||| ||| || ||||||||||| || Sbjct 914353 CATCCCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 914412 Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 || | || | |||| | || ||||||||||||||||||||||||| | |||||| || | Sbjct 914413 GGACAAGGT-GCGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAG 914471 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 || | || ||||| || ||||| ||| | | ||| | ||||||||| || Sbjct 914472 GGGGGATGCCCTCCTTGTCTTGGATCTT-TGCCTTGACATTCTCGATGGTGTCGCTGGGC 914530 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || ||||| || || ||||||||||||||||| ||||| Sbjct 914531 TCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 914583 Score = 132 bits (146), Expect = 3e-26 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || || |||| | || |||| ||| || ||| ||| || ||||||||||| |||| | Sbjct 914129 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 914188 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | |||| | || |||||||||||||| |||||||||| | ||||||||| | || Sbjct 914189 AAGGT-GCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 914247 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCA 44288 | || ||||| || ||||| ||| | | ||| | ||||||||| || || | Sbjct 914248 GATGCCCTCCTTGTCTTGGATCTT-TGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGA 914306 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 914307 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 914355 >seq2283 Length=901578 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| || ||||||||||| |||| || ||| | || ||| Sbjct 857270 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCTTCC 857211 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | | |||||| || | || | ||||| || ||| Sbjct 857210 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGG 857151 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | |||||||| || |||||||||| || || ||||| Sbjct 857150 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 857091 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||| ||||||||||| Sbjct 857090 CCGGTCAGGGTCTTCACAAAGATTTGCAT 857062 >seq4625 Length=314844 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| |||||||||| ||||| || || ||| || Sbjct 137053 AGTCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTC--AAAGT--ACGT 137108 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || ||||| |||| | ||||| || ||||| | |||||| Sbjct 137109 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTTCC 137168 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || ||| || || | || ||| |||| | || Sbjct 137169 TTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAGTG 137228 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGAT 44331 || ||||| || || ||||| || ||||| || Sbjct 137229 ATGGTCTTCCCTGTAAGGGTTTTTACGAAAAT 137260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359822069276439