Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq3842 190 3e-43 seq1231 131 2e-25 >seq3842 Length=375763 Score = 190 bits (210), Expect = 3e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 9254 TGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACA 9313 ||||||||||||| ||||| || | |||||||||||| || || || || |||||||||| Sbjct 11039 TGGTCTGGAACAGCTGCTCATCGCCCCATTCTGGATGCTCCTGCTTAAGCACATCGCACA 10980 Query 9314 CCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAA 9373 | | ||||||||||| |||||||| |||||||||||||| |||||||| ||||| |||| Sbjct 10979 CTCGGTTGTGTTCCCGCAGCCAGATTGTGGCGTACATCATCAGCCCAGGCACCAGCCCAA 10920 Query 9374 AAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGT 9433 | | || || || ||||| | ||| || ||| || | ||| ||||||||||| | Sbjct 10919 AGACTTCCTGTCCCACAGCAAACTGCAGGTGTTCAGGGGTATGGGGGGGATAGATCATCT 10860 Query 9434 GCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCTGA 9486 |||| |||||||| | ||| ||||||| ||| || ||||| |||||| Sbjct 10859 CTGCCTGAGTATCTTTGACTGTGGGAGGATACACTTCTCCATCAATTATCTGA 10807 Score = 129 bits (142), Expect = 8e-25 Identities = 214/309 (69%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 8278 ATCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTG 8337 ||| ||||| ||| || | || ||||| || || || || | |||| |||||||| Sbjct 12728 ATCCGGAACATTGAAGGCAGTGAAGGGACAGCCTTTCACATTATTGCAGATGAGAGACTG 12669 Query 8338 AATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCA 8397 ||| | || | |||| ||| || || || || || || || ||||| |||||||| Sbjct 12668 AATGGAGGCAGTGTTGATGATTTTAAAACCTACTTCGCCACCAAAAGTGCTCGGCTTCCA 12609 Query 8398 GTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAA 8457 ||| | || || || || | || |||| || ||||| | |||||| || || || | Sbjct 12608 GTAGTCAGGAGAACATATAGCATTACCCATCAGTCCTTTCAAGGAGAAGGGTGCTCCAAC 12549 Query 8458 CTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGT 8517 || | ||| | ||||| |||||||| | ||||| |||||||| |||| | || | Sbjct 12548 TTCTACCATGGTTTCACCAAAGATGGCATCTGGACGAGGCTTTTCTACCAGAAGGCCAGG 12489 Query 8518 GTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTT 8577 || ||||||| ||| || | ||| || || ||||| | || ||||| || ||||| Sbjct 12488 ATAGAGCTCCATAGCGTCAATGTCGCCATAGAGGGCTTCCAACTCTGCAGCCATTTCCTT 12429 Query 8578 TTCTCCTGT 8586 || ||||| Sbjct 12428 CTCACCTGT 12420 Score = 123 bits (136), Expect = 4e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | || Sbjct 9888 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 9829 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 ||| || || || || || ||| |||| || |||||||| | || |||||||||||||| Sbjct 9828 AAATTGATGAGTAAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 9769 Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 9806 || |||| | |||| |||||| ||||||||||| Sbjct 9768 AGGGATGAACTTTCTCCTTAGAAGAAATTTTTCCACAA 9731 Score = 102 bits (112), Expect = 1e-16 Identities = 185/266 (70%), Gaps = 6/266 (2%) Strand=Plus/Minus Query 8944 CTTACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGAGTC 9003 ||||| | || || |||||||| ||||| ||||| || | |||||||| || || | Sbjct 11646 CTTACCCTCCCAGCAATTTGTTTGGTGAATGATTCAACAAACTGGGTAAGTCCATGTTCC 11587 Query 9004 ATGAGTATGGAATTGTTGTAGACGAA--GTTAACGTAGTCATACTTTGTTTTATCAATCT 9061 | ||||| || |||||||||| || ||| | |||| || | | ||||||| Sbjct 11586 AGTAGTATAGAGTTGTTGTAGAGAAACTGTTGA--TAGTTGTATTCCTGATCCTCAATCT 11529 Query 9062 CAAATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATAC 9121 ||| || || |||| || | |||||||||||| | |||||||||| | | || | Sbjct 11528 GAAAGGCGTCGGGCAGAAGGGGATGCCAGTGATAGAGTGTGTTAAACTCAGCAGCGATGC 11469 Query 9122 GATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAA 9180 | || ||||||||||| | | ||| ||||| || || | |||| ||||| || Sbjct 11468 GGTTCTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGCTTGAAG 11410 Query 9181 TGGTAGCCGCTGAGCTGCTGAACGTA 9206 || ||||| || | ||||| ||||| Sbjct 11409 TGATAGCCACTCAAGTGCTGTACGTA 11384 Score = 86.0 bits (94), Expect = 9e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| || || | |||||||| || || | || || ||||| || || | Sbjct 8995 TCACCTTTCACACCCATGGGAGTTGGGCAGTCTTCAGCCACAGGAGGAAGGGCTCTGGTA 8936 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 ||||||||||| || ||||| |||||||||||| ||| | |||| | || || | Sbjct 8935 TAATAGGAGAGGTTAGAGAATGCTTCCCAGCTTTTGTAGCCATAGTGCATATTATAAGTT 8876 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || || || |||||||||| |||||| |||| Sbjct 8875 GGTGGACTATCAATCAAATGGGATCTGGCTGA 8844 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 10383 CAATCTTACGAGTTGTGCAGTCATGGTCGTAGAAACCCGTATGCGTGCAATCGCATTTGT 10442 ||| |||||| |||| |||| | | | || || || || | || ||||| || || | Sbjct 7897 CAAACTTACGTGTTGAACAGTTTTCGCCATAAAATCCTGTCCGGGTACAATCACACTTAT 7838 Query 10443 ACTGATGGAACCCCACGGTCATGCAGATGCCTCTGTTTTGACACGGATGGGAGCAACAAG 10502 |||| | ||| || ||| |||| ||||| |||||||||||||| || | ||| || |||| Sbjct 7837 ACTGGTCGAATCCTACGCTCATACAGATACCTCTGTTTTGACATGGGTTGGAACAGCAAG 7778 Query 10503 GGTTGGCTACGATG 10516 | || ||| | ||| Sbjct 7777 GATTTGCTGCAATG 7764 >seq1231 Length=1099651 Score = 131 bits (144), Expect = 2e-25 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408 |||||| ||| ||||| || ||||| || ||||| |||||||||||| | |||| Sbjct 787743 TCTTGATGATGTTAAACCCTGTCTCACCGCCAAATGTGCTTGGCTTCCAGTACTCTGGGG 787802 Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468 |||||||| ||| | | ||| ||||||||||| || |||||||| | ||| | || | Sbjct 787803 AGCAGATGGGATTCCCTAGGAGACCTTTGAGGGAAAAGGGAGCCCCAATCTCTATCATAC 787862 Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528 |||| || ||||| | ||| || || |||||| | | || || | ||| | |||| Sbjct 787863 TCTCCCCAAAGATAGAGTTCGGTAGGCACTTTTCAAGAAGCAACCCTGGGTAGAATTCCA 787922 Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585 || |||| ||||||||| || || | || || || |||||||| ||||||| Sbjct 787923 AGGCATCGATGTCTCCGTACAGCTCCTCCAACTCTGCTGCCATCTCCTTCTCTCCTG 787979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716532994847680