Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2283 159 8e-34 seq6496 149 2e-30 >seq2283 Length=901578 Score = 159 bits (176), Expect = 8e-34 Identities = 170/222 (77%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| |||| || ||||| || || || || || || |||||||| |||| Sbjct 857054 AGGTCAAAATGC---AAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGG 857110 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| ||||||||||||| || || ||||| ||||| |||||||| || Sbjct 857111 TGGA--GCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCAT 857168 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 ||| || |||||||| | || ||||| || || || ||||| |||||||| | ||||| Sbjct 857169 CCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGTCGCACTCT 857228 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | |||| || ||| |||| ||||| || || ||||| || || Sbjct 857229 TTCCGACTACAACATCCAGAAAGAGTCGACCCTGCACCTGGT 857270 >seq6496 Length=1068356 Score = 149 bits (164), Expect = 2e-30 Identities = 169/222 (76%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||||||||| || || ||| Sbjct 914580 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGA--GCCCAGCG 914523 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| |||||| || ||||| || || ||||| || ||||||| Sbjct 914522 ACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCAGC 914463 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100 | | || ||||| ||||| || ||||| |||||||| | || |||| |||| || ||| Sbjct 914462 AGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCAC-CTTGTCCGACTACAAC 914404 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || ||||| || || | | |||||| Sbjct 914403 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGA 914362 Score = 134 bits (148), Expect = 3e-26 Identities = 158/208 (76%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| ||||| || || ||| Sbjct 914352 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGA--GCCCAGCG 914295 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| |||||| || ||||| || || ||||| || || |||| Sbjct 914294 ACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGATCAGC 914235 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100 | | || ||||| || || || ||||| |||||||| | || |||| |||| || ||| Sbjct 914234 AGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCAC-CTTGTCCGACTACAAC 914176 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTG 178128 |||| ||||| || || ||||| |||| Sbjct 914175 ATCCAGAAAGAGTCCACCCTGCA-CTTG 914149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203139473202198