Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1388 127 2e-24 seq194 123 3e-23 seq98 122 1e-22 seq5791 116 4e-21 >seq1388 Length=553042 Score = 127 bits (140), Expect = 2e-24 Identities = 172/238 (72%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 24324 GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttt 24383 ||||| || ||| ||| || ||||||||||| || || || ||||| |||||| | | Sbjct 274650 GCCCAGTCTGCCGCCTTCTTCACACAAGGCATCGTTTCAATGGCATTGAAGAGAAATTCC 274591 Query 24384 ttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATG 24443 |||| || ||||||| |||| || || | | ||||||||| || ||||| ||| Sbjct 274590 CTTTCTTTGGAATCTTTA----ATGTGTCCATGAGGA-ACTATACATCTCAGAATGTATG 274536 Query 24444 TTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATA 24503 |||| ||||| ||||| || || |||||||| || || |||||||| || ||| Sbjct 274535 TTTTACATGGCAATTTGGAAGCCATAGAAACAGTGGGCTTCTGTAATCTGAACGTCTTGG 274476 Query 24504 CAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 24561 | ||| || || || | || ||||| ||| | |||| || |||||||| || |||| Sbjct 274475 CTAAAACGCTCCACTCAGTTGTCATTTACTCTGCCGTTGCTTGCTGCAAAGAAAGCCA 274418 >seq194 Length=1916396 Score = 123 bits (136), Expect = 3e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| ||||| ||||| | ||| |||||||| ||||| |||||||| || || || || | Sbjct 225184 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 225125 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| ||||| || ||||| || ||||||||||| || ||||| ||||| ||||||| Sbjct 225124 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 225065 Query 24277 CAATAAGTCTTTCTCC 24292 | | || | |||||| Sbjct 225064 CTACAACACGTTCTCC 225049 Score = 113 bits (124), Expect = 5e-20 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||||| || |||||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 223366 ATCTTTAATGTAAGTATCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 223307 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 ||||| || || |||||||| | ||| || |||||||| |||||| | |||||| || Sbjct 223306 AATTTGGAAGCCATAGAAACAGCGAGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 223247 >seq98 Length=368967 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| ||||| ||||| ||||| ||||| || ||||| || ||||| | Sbjct 70679 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAAATGTTGCTGGTGTAAGGTTCAATG 70620 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 70619 GACTCATTATTGCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 70560 Query 53270 CTATTTCTAAGACCGTA 53286 || ||||| | ||| || Sbjct 70559 CTGTTTCTTACACCATA 70543 Score = 114 bits (126), Expect = 2e-20 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| || | ||| |||||||||||||| | || || ||||| ||||| || || | | Sbjct 43258 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATTCTTGCTGCCAAGA 43199 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||||| || || || | ||||| | || || ||| |||| || | || ||| |||| Sbjct 43198 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCCA 43139 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||||||||| || || ||| |||||| |||||||| || ||||| Sbjct 43138 GTTCTACCGTGGTGACCCCACTATATAAGCCTTGGATTACTTTCAT 43093 Score = 113 bits (124), Expect = 5e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084 || |||||||||||| |||||||| |||||||||||||| | || ||||| |||| | Sbjct 59896 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCACG 59837 Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144 ||||| || |||||||| ||||| || | ||| |||||| | | || || |||||||| Sbjct 59836 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTGAATGCCA 59777 Query 54145 CGGTTCCAAGTATAT 54159 || |||| ||| || Sbjct 59776 AGGCTCCAGGTAGAT 59762 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 73141 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 73082 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| ||| || |||||||| ||||| || || || || || ||||| || | | || | Sbjct 73081 TCAAAGACTGGCTTTGATCAATGAAAGCCCCTCTCTCGGCTGCCATCTTGAGAACAGTTT 73022 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 73021 TCTGAGAGATTTCCCATACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 72971 >seq5791 Length=909484 Score = 116 bits (128), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218 || ||||| || || | ||| |||||||| |||||||| ||||| || || | ||| || Sbjct 169546 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTCTTCTTT 169605 Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 169606 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 169665 Query 24279 ATAAGTCTTTCTCC 24292 | | |||||| || Sbjct 169666 ACCACTCTTTCCCC 169679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593522911066560