Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq1019 260 2e-64 seq7435 127 2e-24 >seq1019 Length=107042 Score = 260 bits (288), Expect = 2e-64 Identities = 260/337 (77%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| || ||||| ||||| | | | | |||| | |||| |||||||||||||| Sbjct 43709 AGCAGGGCTTCAATGTCTGGCTCGATGTCTATGGTCGGAAAGCGACGGCTGTACCTGCGC 43768 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 |||||| ||||||| |||||||| ||||||||| || ||||| || | |||||||||| Sbjct 43769 ACGGGCACACCGTCAGGACCCACCAGGAACTTCTCAAAATTCCATGCAATGTCGTTGCGG 43828 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| ||||||||| |||| || |||||| || ||| | | ||||||||| Sbjct 43829 CACACCGGAGACCAGATGATGAACTTGGGGTCAGCCATGAGTGCAGTGGCGTCGTCGCTG 43888 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 ||||| |||||||| || || |||||||| |||||||| || || ||||| || ||| Sbjct 43889 GGCGCTGGCAGGGCTTCCCGAAGGAAGGCAAAGAGCGGGTGCGCATGCGCACCATTCACC 43948 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 ||||||||||||||||| | || || |||||||| ||| || || ||||||| ||| Sbjct 43949 TCGCACTTCTCGAAGAGAGTGAAATTGGGCTCGAACCCGCCGCCGGGTCGGACGTACTTG 44008 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 || ||| || ||| || | |||| |||||| |||| Sbjct 44009 AGAGAATTCAGGATTTCTTCGTTCTTGGCGTTCTCCT 44045 Score = 205 bits (226), Expect = 1e-47 Identities = 181/226 (80%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || || |||||||| |||||||| || ||||| ||||| ||||| | || |||| Sbjct 44321 CCTGATGCCCAAACTGGTTGCACGGGAAGCCCAGCACGACCAGGCCCCGGGGCCCGAGGC 44380 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 ||||||||||||| |||||||| ||||| ||||||| |||| | |||||||||||||| | Sbjct 44381 GCCGCTGCAGCTCATTCATCTGGGTGTAGTCCCGGATCGTGGTGCCTCAGAGGGACGCCA 44440 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 | ||||||||||||| ||| |||||| | | |||| | |||||| || || || || | Sbjct 44441 CATTCTCGATGAGCAGCACCTTGCCCCGCAGGGAGCCCAGGCTCACGGGCTCCCCGCCAG 44500 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGATCTGGTCTCTGCCGC 83616 | |||||| |||||||||||||| || || |||| | ||||| Sbjct 44501 CCAGCGGGCGCGCTGAGAAGGCGTATACGGACTGGGTCGCCGCCGC 44546 >seq7435 Length=308333 Score = 127 bits (140), Expect = 2e-24 Identities = 207/288 (72%), Gaps = 9/288 (3%) Strand=Plus/Plus Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468 ||| ||||||| || |||| | ||| || ||| ||| ||||||||| || ||| Sbjct 278693 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCCCGCCTGC 278751 Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528 | ||| || | || || |||||||| || |||||||||| || ||| | ||||||| Sbjct 278752 TGGTGCACCTCTTCCCCGAGCTCTTCACCCATGAGAACCTGCGCAAGCAGTACAACTGCA 278811 Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGC-GCTTGCTCCGGCACTA 50586 ||||||| |||||||| |||| || |||||| ||| | |||| |||| ||||| Sbjct 278812 GCGGCTCCCTGGGCAAGAAGCAG-CTGGACCCGACCCGCATCAAGCTTA-TCCGCCACTA 278869 Query 50587 TGTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGC 50646 |||||| |||| |||| ||| ||||| ||||| |||| ||||| ||| Sbjct 278870 CGTGCAGCTGCTCTACCCCCGGGCCAAAAACGACCGCGTCTGGACTCTGGAGTTCGTGGG 278929 Query 50647 GTGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693 ||||||||||||||||||||||| | |||||| || |||||| Sbjct 278930 CAAGCTGGACGAGCGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 278975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608593066150880