Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq2263 123 2e-23 seq6389 114 1e-20 seq2455 82.4 6e-11 >seq2263 Length=894866 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 ||| |||| |||| || ||||| || || ||||| ||||| | || || | | || Sbjct 850694 GAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATC 850635 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| ||||| ||| | || || ||||||||||| ||| | || ||||| || Sbjct 850634 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTATC 850575 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| ||||| | ||| || |||| ||||||| |||| ||| ||||| Sbjct 850574 CTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 850515 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||||||||| | || || ||||| ||||||||||||| Sbjct 850514 CTTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTTGA 850477 >seq6389 Length=1055299 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || | |||||||| |||| |||||||| || || ||||| ||||| | | Sbjct 901843 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 901902 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || |||||||| || || ||| | || || ||||||||||| ||| Sbjct 901903 AGGGTGCGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 901962 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | ||| || || | |||||| Sbjct 901963 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACC 902022 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| ||||||||||| || | || || || || || |||||| Sbjct 902023 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATT 902070 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| |||| |||||||| || || ||||| ||||| | || ||| | | || Sbjct 901630 AGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCT 901689 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| || || ||| | || || |||||||| || ||| | ||| |||||||| Sbjct 901690 TCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTCT 901749 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||| || || | ||| || || | |||||| |||| ||| |||||| Sbjct 901750 TGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTC 901809 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | || || || || || ||||| Sbjct 901810 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 901841 >seq2455 Length=1213480 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| |||||| | || | |||||| || |||||| | || | Sbjct 1041338 CCACCTCGCAGATGAAGCACCTGGTTCAGGGCGGACTCTTTCTGAATGCTGGGATCGGAA 1041279 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || ||| | ||||||||||||||||||||| | || || ||||||||| | || Sbjct 1041278 AGAGTGTGGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGGTGCTGCTGGTCAAGTGGG 1041219 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||| || ||| || | | || |||| |||||| Sbjct 1041218 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACC 1041159 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| | | || || ||||| || ||||| Sbjct 1041158 TCAAGGGTGATGGTCTTGCCCATCAGGGTCTTCACAAA-ATCTGCAT 1041113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422121423684752