Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6389 159 4e-34 seq2263 141 1e-28 seq2455 87.8 2e-12 >seq6389 Length=1055299 Score = 159 bits (176), Expect = 4e-34 Identities = 162/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || ||||| ||||||||| |||| ||||| ||| Sbjct 902070 AATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 902011 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | |||||| ||| || | ||||| |||||||||||| | ||||| Sbjct 902010 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 901951 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || || |||||||| || | ||||||||| ||||||||| Sbjct 901950 GCAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAA 901891 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||| ||| |||| ||||| || ||| Sbjct 901890 CATCCAGAAAGAGTCCACCCTGCACCTGGTG 901860 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || ||||| ||| | Sbjct 901841 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCCAGC 901782 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| |||||||||||| | || ||| Sbjct 901781 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGATCAG 901722 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || || |||||||| || | ||||||| | |||||||||| Sbjct 901721 CAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAAC 901662 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| |||| ||||| | || ||||||||||||| || Sbjct 901661 ATCCAGAAAGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 901615 >seq2263 Length=894866 Score = 141 bits (156), Expect = 1e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| || || || || || || ||||| ||||||||| | || || || || Sbjct 850479 AAAATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 850538 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | |||| || || | || || ||||| |||||| | ||| Sbjct 850539 AGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCCCCCGAC 850598 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| |||||||| || | ||||| || ||||||| Sbjct 850599 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCCGACTAC 850658 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| ||| | || ||||| || || | ||||||||||| ||| Sbjct 850659 AACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGCTTGAGGGGTGGC 850709 >seq2455 Length=1213480 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/202 (71%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || | |||||| ||||||||| | || ||||| ||| Sbjct 1041113 ATGCAGATTTT-GTGAAGACCCTGATGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 1041171 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||| | ||||| | ||||| ||||||||||| ||||| Sbjct 1041172 GACACCACTGAGAATG-TCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACTTGACCA 1041230 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | ||||||||||||||||| || | | ||| || ||| || Sbjct 1041231 GCAGCACCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCACACTCTTTCCGATCCCAG 1041290 Query 40869 CATCCAGAAGGAGGCCACGCTG 40890 ||| ||||| ||| || | ||| Sbjct 1041291 CATTCAGAAAGAGTCCGCCCTG 1041312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515046781894720