Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq6389 122 6e-23 seq2263 116 2e-21 >seq6389 Length=1055299 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | || |||||||| ||||||||||||||||| || | || Sbjct 901858 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 901917 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || |||| ||||||||| ||| | || ||||||||| Sbjct 901918 TCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 901977 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | || | || | ||| | | ||||| || | |||||||| Sbjct 901978 TGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTC 902037 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || ||||| ||||||||||| Sbjct 902038 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 902069 Score = 120 bits (132), Expect = 2e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 |||||||| ||||||||||||||| || || || | || |||| |||||| || || || Sbjct 901651 TCTTTCTGGATGTTGTAGTCGGACAAGGTG-CGCCCATCTTCCAGCTGCTTCCCAGCAAA 901709 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || |||| |||||| || ||| | || ||||||||| |||||| ||| | || Sbjct 901710 GATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATT 901769 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||| | | ||||| |||| |||||||| |||||||| || || ||||| Sbjct 901770 CTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 901829 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 901830 GAAGATCTGCATC 901842 >seq2263 Length=894866 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | || |||||||| |||||||||||||| || || | || Sbjct 850693 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCT 850634 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||||||||| || ||||||| |||||||||| ||| | | |||||| || Sbjct 850633 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTATCC 850574 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | || | | || || |||| |||||||| Sbjct 850573 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 850514 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || || ||||||||||| ||||| Sbjct 850513 TTGCCGGTCAGGGTCTTCACAAAGATTTGCAT 850482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322966586856320