Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq98 102 7e-17 seq2263 96.9 3e-15 seq4565 87.8 2e-12 >seq98 Length=368967 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| |||||| || || || || ||||| || || || ||||| || || || || Sbjct 61283 ACCTCATCTTTGCTGGTATATTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTT 61224 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 |||| || ||||||||| || ||||| || ||||| |||||||||||||| || || Sbjct 61223 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGAGTT 61164 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196 || ||||| ||| ||||| ||||| || Sbjct 61163 CCTGTCTCTGTCTGAGACTCAATGATAGC 61135 >seq2263 Length=894866 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 ||||| |||||||| || || ||||| ||||| ||||| || |||||| | || || || Sbjct 850477 TCAAA-ATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAG 850535 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306 || |||| |||| | || || | || ||| ||||| || | || ||| Sbjct 850536 CCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCCCCC 850595 Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366 ||||||||| | || || || || ||||| ||| ||||||| | ||| | ||| Sbjct 850596 GACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCCGAC 850655 Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| || ||||| ||||| || || ||||| || | ||||||| || Sbjct 850656 TACAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGCTTGAGGGGTGG 850708 >seq4565 Length=307966 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 31199 ATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGT 31258 ||||||||||| || || ||||| || || ||||| || | |||||||| || || | Sbjct 133585 ATTTTCGTAAAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTCAGATACA 133526 Query 31259 GTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCG 31317 | ||| || || || || || ||| |||||||| | || | |||||||| | Sbjct 133525 ATAAAAAATGTAAAGACCAAG-ATCCAGGATAAGGAAGGAATTCCTTCTGACCAGCAAAG 133467 Query 31318 TCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAACATTC 31376 || || || |||||||| || ||||||| | | | ||| | || |||||||||| Sbjct 133466 ACTGATTTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTT----GACTATAACATTC 133412 Query 31377 AAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 |||| || | ||||||||||| || | ||||| Sbjct 133411 AAAAGGAGACCACTCTTCATCTTGTGTTGAGACT 133378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445617224274240