Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq3797 178 2e-39 seq1221 134 2e-26 >seq3797 Length=372581 Score = 178 bits (196), Expect = 2e-39 Identities = 179/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 9632 TGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACA 9691 ||||||| ||||| || || || | |||||||||||| || | || || |||||||||| Sbjct 11001 TGGTCTGGAACAGCTGCTCATCGCCCCATTCTGGATGCTCCTGCTTAAGCACATCGCACA 10942 Query 9692 CTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAA 9751 ||| ||||||||||| |||||||| || ||||||||||| || ||||||||||| |||| Sbjct 10941 CTCGGTTGTGTTCCCGCAGCCAGATTGTGGCGTACATCATCAGCCCAGGCACCAGCCCAA 10882 Query 9752 AAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGT 9811 | | || || || ||||| | ||| | ||| || | ||| ||||||||||| | Sbjct 10881 AGACTTCCTGTCCCACAGCAAACTGCAGGTGTTCAGGGGTATGGGGGGGATAGATCATCT 10822 Query 9812 GCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATCTGA 9864 |||| ||||||||| | ||| ||||||| ||| || ||||| |||||| Sbjct 10821 CTGCCTGAGTATCTTTGACTGTGGGAGGATACACTTCTCCATCAATTATCTGA 10769 Score = 123 bits (136), Expect = 4e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087 |||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | || Sbjct 9850 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 9791 Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147 ||| || || || || || ||| |||| || |||||||| | || |||||||||||||| Sbjct 9790 AAATTGATGGGTAAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 9731 Query 10148 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 10185 || |||| | |||| |||||| ||||||||||| Sbjct 9730 AGGGATGAACTTTCTCCTTAGAAGAAATTTTTCCACAA 9693 Score = 98.7 bits (108), Expect = 1e-15 Identities = 184/265 (69%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381 ||||| | ||||| |||||||| ||||| ||||| || | |||||||| || || | Sbjct 11608 CTTACCCTCCCAGCAATTTGTTTGGTGAATGATTCAACAAACTGGGTAAGTCCATGTTCC 11549 Query 9382 ATGAGTATGGAATTGTTGTAAACGAAGTTAATG-TAGTCATACTTTGTTTTATCAATCTC 9440 | ||||| || |||||||| | ||| | || |||| || | | ||||||| Sbjct 11548 AGTAGTATAGAGTTGTTGTAGA-GAAACTGTTGATAGTTGTATTCCTGATCCTCAATCTG 11490 Query 9441 AAACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACG 9500 ||| || || |||| || | |||||||||||| | |||||||||| | | || || Sbjct 11489 AAAGGCGTCGGGCAGAAGGGGATGCCAGTGATAGAGTGTGTTAAACTCAGCAGCGATGCG 11430 Query 9501 ATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAAGT 9559 || ||||||||||| | | ||| ||||| || || | |||| || || |||| Sbjct 11429 GTTCTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGCTTGAAGT 11371 Query 9560 GGTAGCCGCTGAGCTGCTGAACATA 9584 | ||||| || | ||||| || || Sbjct 11370 GATAGCCACTCAAGTGCTGTACGTA 11346 Score = 87.8 bits (96), Expect = 3e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346 |||||||| || || | |||||||| || || | || || ||||| || || | Sbjct 8957 TCACCTTTCACACCCATGGGAGTTGGGCAGTCTTCAGCCACAGGAGGAAGGGCTCTGGTA 8898 Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406 ||||||||||| || ||||| |||||||||||| ||| | |||| | || || | Sbjct 8897 TAATAGGAGAGGTTAGAGAATGCTTCCCAGCTTTTGTAGCCATAGTGCATATTATAAGTT 8838 Query 10407 GGAGGGCTGTCAATCAAATCGGATCTACCTGAA 10439 || || || |||||||||| |||||| ||||| Sbjct 8837 GGTGGACTATCAATCAAATGGGATCTGGCTGAA 8805 >seq1221 Length=1091226 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798 |||||| ||| |||||| || ||||| || ||||| || |||||||| | |||| Sbjct 781133 TCTTGATGATGTTAAACCCTGTCTCACCGCCAAATGTGCTTGGCTTCCAGTACTCTGGGG 781192 Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858 |||||||| ||| | | ||| |||||||||||||| |||||||| | ||| | || | Sbjct 781193 AGCAGATGGGATTCCCTAGGAGACCTTTGAGGGAAAAGGGAGCCCCAATCTCTATCATAC 781252 Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918 |||| || ||||| | ||| || || |||||| | | || || | ||| || |||| Sbjct 781253 TCTCCCCAAAGATAGAGTTCGGTAGGCACTTTTCAAGAAGCAACCCTGGGTAGAATTCCA 781312 Query 8919 CAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975 || |||||||||||||| || || | || || || || ||||| ||||||| Sbjct 781313 AGGCATCGATGTCTCCGTACAGCTCCTCCAACTCTGCTGCCATCTCCTTCTCTCCTG 781369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708287692175680