Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq7468 158 2e-34 seq5291 158 2e-34 seq6724 154 2e-33 seq5123 149 1e-31 seq4303 122 1e-23 >seq7468 Length=168832 Score = 158 bits (174), Expect = 2e-34 Identities = 195/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | ||| || || || ||||| || ||||| || ||||||||| Sbjct 62848 GCCAAGCGTCACCGTAAGGTTCTGCGTGACAATATCCAGGGCATCACAAAACCAGCTATC 62789 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || ||||| || || || ||||||||||| ||||||| | | ||||| || | Sbjct 62788 CGGCGCCTGGCCCGCCGCGGCGGAGTCAAGCGCATCTCTGGCCTCATTTATGAGGAAACC 62729 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | ||| | ||||| ||| || || | || ||| || ||| || ||| Sbjct 62728 CGTGGGGTGCTCAAGGTGTTCCTGGAGAATGTGATTCGGGACGCTGTCACCTACACGGAG 62669 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| ||||| ||||| ||||| ||||||| | ||||| || | ||||| |||||| Sbjct 62668 CACGCAAAACGCAAGACGGTCACGGCCATGGACGTAGTCTACGCGCTTAAACGACAAGGC 62609 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | ||||||||||| ||||| Sbjct 62608 CGTACCCTGTATGGTTTTGGTGGTTAA 62582 >seq5291 Length=167001 Score = 158 bits (174), Expect = 2e-34 Identities = 185/250 (74%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || || ||||| || || |||||||| |||||||| ||||| ||||||||||| ||||| Sbjct 145220 GACAATATCCAGGGCATTACCAAGCCTGCTATCCGGCGTCTTGCTCGTCGTGGCGGAGTG 145279 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| | ||||| || |||| || |||| ||| | || |||||| | || | || Sbjct 145280 AAGCGTATTTCTGGTCTGATCTACGAGGAGACTCGCGGCGTGTTGAAGGTGTTTTTGGAG 145339 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| |||| |||||| || || || ||||| || || || |||||||| || || Sbjct 145340 AACGTGATCCGCGATGCTGTCACTTACACGGAGCATGCCAAGCGCAAGACTGTTACGGCC 145399 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| |||| ||||| || || | | ||||| || || ||||| Sbjct 145400 ATGGATGTGGTATATGCGCTGAAGCGTCAGGGGCGCACCCTCTATGGCTTCGGCGGTTAA 145459 Query 16700 TCTTCTAATC 16709 || | |||| Sbjct 145460 TCCTTAAATC 145469 Score = 156 bits (172), Expect = 7e-34 Identities = 191/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||||| | || || || |||||||| ||||| || ||||| ||||| Sbjct 62365 CGCTAAGCGTCATCGCAAAGTGCTGCGCGACAACATCCAGGGAATTACTAAGCCTGCTAT 62424 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| || || || |||||||| | ||||| | | ||||| |||| Sbjct 62425 CCGGCGTCTTGCTCGGCGCGGCGGTGTCAAGCGCATTTCTGGCCTCATTTATGAGGAGAC 62484 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| ||||| | ||| | ||| |||||||| ||| ||| || ||| || || Sbjct 62485 CCGCGGAGTTCTGAAGGTTTTCTTGGAGAACGTTATCCGTGACGCTGTCACCTACACGGA 62544 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || || ||||| || || |||||||| | || || || | || ||||| || Sbjct 62545 GCATGCGAAGCGGAAGACGGTGACTGCCATGGATGTGGTGTACGCTCTTAAGCGTCAGGG 62604 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | || || ||||| Sbjct 62605 GCGCACTCTCTACGGCTTTGG 62625 Score = 138 bits (152), Expect = 2e-28 Identities = 196/273 (72%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| ||||| | | || || |||| |||||||| || || ||||| || ||||| Sbjct 131980 GCTAAGCGCCATCGTAAGGTC-CTGAGAGACAACATCCAGGGCATTACCAAACCTGCTAT 131922 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| |||||||| || || || || |||||| | ||||| | |||||||||||| Sbjct 131921 CCGTCGCCTGGCTCGACGAGGCGGGGTTAAGCGTATTTCTGGCCTCATCTATGAAGAGAC 131862 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || |||| | || || ||| || |||| ||||| || || ||||| Sbjct 131861 TCGTGGAGTCCTGAAAGTTTTTCTGGAGAATGTCATCCGCGATGCCGTCACTTACACCGA 131802 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || || || || || | ||||| | || || || | || || || || Sbjct 131801 GCACGCCAAGCGCAAAACGGTAACAGCTATGGACGTGGTATACGCGCTTAAGCGACAGGG 131742 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTC 16704 || | | ||||||||||| | || ||||| Sbjct 131741 GCGCACCCTCTATGGTTTTGGCGGCTAGTCTTC 131709 Score = 134 bits (148), Expect = 2e-27 Identities = 194/274 (71%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || || | | | || || |||||||| || ||||| ||||| || || Sbjct 94266 CGCTAAGCGCCACCGTAAGGTTTTGCGTGACAACATCCAGGGCATCACTAAGCCTGCAAT 94207 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| | ||||||||||| || || ||||| | ||||| | |||||||||||| Sbjct 94206 TCGTCGTTTAGCTCGTCGTGGCGGTGTTAAGCGCATTTCTGGCCTCATCTATGAAGAGAC 94147 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || | || | || || ||| ||| || | || ||| || ||| || || Sbjct 94146 TCGAGGGGTGCTCAAAGTGTTTCTGGAGAACGTGATTCGGGACGCTGTCACCTACACGGA 94087 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||||| ||||| ||||| | ||||| | ||||| || | || || ||||| Sbjct 94086 ACACGCCAAACGCAAGACGGTCACGGCTATGGACGTTGTCTACGCTCTCAAGCGCCAAGG 94027 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 || | |||| || ||||| | |||| |||| Sbjct 94026 ACGCACTCTTTACGGATTTGGTGGCTAATGTTCT 93993 >seq6724 Length=198708 Score = 154 bits (170), Expect = 2e-33 Identities = 197/269 (73%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| ||||| | | |||| |||| |||||||| || || |||||||| || | Sbjct 184296 CGCTAAGCGCCATCGTA-AGGTCTTGAGAGACAACATCCAGGGCATTACCAAGCCCGCCA 184354 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| |||||||| || || |||||||| |||| || | |||||||||||| Sbjct 184355 TTCGGCGTCTTGCTCGTCGCGGAGGTGTCAAGCGGATCTCCGGCCTCATCTATGAAGAGA 184414 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| | ||| ||||| | ||||| ||| ||| |||| || || || ||| || | Sbjct 184415 CTCGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTCATCCGGGACGCGGTCACCTACACTG 184474 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| | ||||| | || || || | || ||||| | Sbjct 184475 AGCACGCCAAGCGCAAGACCGTCACTGCTATGGACGTGGTGTACGCCCTTAAGCGTCAGG 184534 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | || | | |||||||| ||| | ||| Sbjct 184535 GGCGCACCCTGTATGGTTTCGGAGGCTAA 184563 >seq5123 Length=345859 Score = 149 bits (164), Expect = 1e-31 Identities = 191/261 (73%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | | | || || || || ||||| || ||||||||||| || || Sbjct 231467 GCCAAGCGTCACCGTA-AGGTGTTACGTGACAATATCCAGGGCATCACCAAGCCGGCCAT 231525 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || || ||||| || ||||||||| |||| ||| || | || || |||| Sbjct 231526 CCGGCGCCTAGCCCGGCGTGGCGGGGTCAAGCGTATCTCCGGACTGATTTACGAGGAGAC 231585 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || | ||| | ||| | ||| ||| |||| || ||| | || || || Sbjct 231586 TCGTGGGGTGCTCAAGGTGTTCTTGGAGAACGTGATCCGGGACGCTGTAACATACACGGA 231645 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| |||||||| | ||||| || | ||||| ||||| Sbjct 231646 GCACGCCAAGCGCAAGACTGTCACAGCCATGGATGTTGTCTACGCCCTTAAACGCCAAGG 231705 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 |||| | ||||| ||||| Sbjct 231706 ACGTACCCTCTATGGCTTTGG 231726 >seq4303 Length=435137 Score = 122 bits (134), Expect = 1e-23 Identities = 190/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| || || |||| | | | || ||||||||||| || || || ||||| || || Sbjct 144371 CGCTAAACGCCACCGCAAAGTTTTACGTGATAACATCCAGGGTATTACTAAGCCTGCCAT 144430 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || | ||||||||||| || || ||||| ||||||| | | || || || | Sbjct 144431 CCGCCGCTTAGCTCGTCGTGGAGGCGTTAAGCGCATCTCTGGCCTTATTTACGAGGAAAC 144490 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| |||| || | | || |||| ||| ||| | || || || Sbjct 144491 GCGCGGAGTTCTTAAGGTCTTTCTGGAAAATGTGATCCGTGACGCTGTTACTTACACGGA 144550 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| ||||||||||||||||| ||||||| | || || || | || || || || Sbjct 144551 GCACGCCAAACGTAAGACTGTCACGGCCATGGACGTGGTTTACGCGCTCAAGCGCCAGGG 144610 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 || | | ||||| || || | |||| || Sbjct 144611 TCGCACCCTCTATGGCTTCGGCGGCTAATATT 144642 Score = 122 bits (134), Expect = 1e-23 Identities = 175/247 (71%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || || |||||||| || |||||||| || || ||||| || ||||| || ||||| Sbjct 175361 TCTGCGCGACAACATCCAGGGCATCACCAAACCTGCGATCCGGCGCCTGGCCCGCCGTGG 175420 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || |||||| |||| || | |||| || |||| ||| | || | ||| | || Sbjct 175421 CGGCGTTAAGCGTATCTCCGGCCTCATCTACGAGGAGACTCGCGGGGTGCTTAAGGTGTT 175480 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | ||| |||| || || || ||| ||||||||||| || || ||||| || Sbjct 175481 CCTGGAAAACGTGATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACGGT 175540 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| | ||||| | ||||| || | || || || || || | | || || ||||| Sbjct 175541 CACTGCTATGGACGTGGTCTACGCGCTCAAGCGCCAGGGTCGCACTCTGTACGGCTTTGG 175600 Query 16693 AAGTTAA 16699 | | ||| Sbjct 175601 AGGCTAA 175607 Score = 122 bits (134), Expect = 1e-23 Identities = 171/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || || |||||||| || |||||||| || || ||||| || ||||| || ||||| Sbjct 183152 TCTGCGCGACAACATCCAGGGCATCACCAAACCTGCGATCCGGCGCCTGGCCCGCCGTGG 183093 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || |||||| |||| || | |||| || |||| ||| | || | ||| | || Sbjct 183092 CGGCGTTAAGCGTATCTCCGGCCTCATCTACGAGGAGACTCGCGGGGTGCTTAAGGTGTT 183033 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | ||| |||| || || || ||| ||||||||||| || || ||||| || Sbjct 183032 CCTGGAAAACGTGATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACGGT 182973 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| | ||||| | ||||| || | || || || || |||| | || ||||| || Sbjct 182972 CACTGCTATGGACGTGGTCTACGCGCTCAAGCGCCAGGGTCGTACTCTGTACGGTTTCGG 182913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79050722172996