Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4873 127 1e-24 seq5954 122 6e-23 seq2174 109 4e-19 seq10967 104 2e-17 seq15156 100 2e-16 seq2107 96.9 2e-15 seq18554 86.0 4e-12 seq11086 84.2 1e-11 seq4974 84.2 1e-11 >seq4873 Length=34506 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 3505 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 3446 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 3445 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 3411 >seq5954 Length=6631 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| |||||||| ||||| || |||||||| Sbjct 1453 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 1394 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 1393 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1359 >seq2174 Length=749655 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||| ||||||||||||||||||||||| |||||||| | ||| || |||||||| Sbjct 419840 AAGCTTGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTGGGGACAGTGGGAATCTCGT 419781 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||||||||||||||||||| || Sbjct 419780 TCATCCATTCATGCGCGTCACTAATTAGATGAGGA 419746 >seq10967 Length=1292 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 1057 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGT 998 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 997 GCCGGTATTTAGCCTTA 981 >seq15156 Length=4797 Score = 100 bits (110), Expect = 2e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | Sbjct 1736 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGTGC 1795 Query 20009 TAATATTTAGCCTTA 20023 |||||||||||| Sbjct 1796 CGGTATTTAGCCTTA 1810 >seq2107 Length=1111364 Score = 96.9 bits (106), Expect = 2e-15 Identities = 77/93 (83%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||||||||||||| || || | |||| ||||| || |||||||| Sbjct 567483 AAGCCCATTCCCTTGGCTGTGGTTTTGCCAGGTCGTAGGTAGGGACAGTGGGAATCTCGT 567424 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 | |||| ||||||||| |||||| ||||||||| Sbjct 567423 TCATCCATTCATGCGCATCACTATTTAGATGAC 567391 >seq18554 Length=1018 Score = 86.0 bits (94), Expect = 4e-12 Identities = 74/92 (80%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 |||||||||||||||||| ||||||| |||||| |||| || | ||||||| | Sbjct 768 CCCGTTCCCTTGGCTGTGATTTCGCTGCATAGTAAGTAGGAACAGTGGGATTCTCGTTCA 827 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || ||||||||| ||||||||||||||| || Sbjct 828 CCCATTCATGCGCATCACTAATTAGATGAGGA 859 >seq11086 Length=4183 Score = 84.2 bits (92), Expect = 1e-11 Identities = 73/91 (80%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 25906 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAAT 25960 ||| ||||||||||||||||||||| |||||| |||| || | ||||||| || Sbjct 1431 CCGCTCCCTTGGCTGTGGTTTCGCTGCATAGTAAGTAGGAACAGTGGGATTCTCGTTCAT 1490 Query 25961 CCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || ||||| || |||||||||||||||| || Sbjct 1491 CCATTCATACGAGTCACTAATTAGATGAGGA 1521 >seq4974 Length=4795 Score = 84.2 bits (92), Expect = 1e-11 Identities = 73/91 (80%), Gaps = 5/91 (5%) Strand=Plus/Minus Query 25906 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAAT 25960 ||||||||||||||||| ||||||| |||||| |||| || | ||||||| | Sbjct 766 CCGTTCCCTTGGCTGTGATTTCGCTGCATAGTAAGTAGGAACAGTGGGATTCTCGTTCAC 707 Query 25961 CCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || |||||||| |||||||||||||||| || Sbjct 706 CCATTCATGCGAGTCACTAATTAGATGAGGA 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334837912171532