Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq194 105 7e-18 seq1388 89.7 6e-13 >seq194 Length=1916396 Score = 105 bits (116), Expect = 7e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| ||||| | || || | ||||||||||||||||||||| ||||| || ||| Sbjct 225164 TCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 225105 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||||||||| || || |||||||| || ||||| || |||| |||||| Sbjct 225104 AAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACAACACGTTC 225052 Score = 104 bits (114), Expect = 3e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| ||||| ||||| || | ||| ||||||||||||||| | || ||||| Sbjct 223368 GAATCTTTAATGTAAGTATCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATG 223309 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||||||||| || |||||||| | |||||| || ||||| |||||||| ||||| | Sbjct 223308 GCAATTTGGAAGCCATAGAAACAGCGAGCTTCTGTAATCTGAACTTCTTGGCTAAATCGC 223249 Query 93473 TCTAC 93477 || || Sbjct 223248 TCCAC 223244 >seq1388 Length=553042 Score = 89.7 bits (98), Expect = 6e-13 Identities = 170/249 (68%), Gaps = 5/249 (2%) Strand=Plus/Minus Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAA 93332 |||| | || ||||| || || ||||| | |||||| | ||||| || || || | Sbjct 274661 TCCAATGCAAGGCCCAGTCTGCCGCCTTCTTCACACAAGGCATCGTTTCAATGGCATTGA 274602 Query 93333 ATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTT 93392 | || | || | || | |||||| |||| | || || ||| |||||| | Sbjct 274601 AGAGAAATTCCCTTTCTTTGGAATCTTTAATGTGTCCAT-GAGGAACT----ATACATCT 274547 Query 93393 CAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCT 93452 ||||||| | || | ||| ||||||||||| || |||||||| ||||| || |||| Sbjct 274546 CAGAATGTATGTTTTACATGGCAATTTGGAAGCCATAGAAACAGTGGGCTTCTGTAATCT 274487 Query 93453 GCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaa 93512 | || ||||| ||| | ||| || || ||||| ||| | || | | |||||||| Sbjct 274486 GAACGTCTTGGCTAAAACGCTCCACTCAGTTGTCATTTACTCTGCCGTTGCTTGCTGCAA 274427 Query 93513 aaaaaGCCA 93521 | ||||||| Sbjct 274426 AGAAAGCCA 274418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556674446533280